Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.27■□□□□ 0.68
CCDC89Q8N998 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC89Q8N998 CR392000.1-201ENST00000624770 1228 ntBASIC19.27■□□□□ 0.68
CCDC89Q8N998 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC89Q8N998 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.27■□□□□ 0.68
CCDC89Q8N998 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCDC89Q8N998 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC89Q8N998 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC89Q8N998 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
CCDC89Q8N998 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCDC89Q8N998 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC89Q8N998 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCDC89Q8N998 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC89Q8N998 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC89Q8N998 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC89Q8N998 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CCDC89Q8N998 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC89Q8N998 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC89Q8N998 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC89Q8N998 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CCDC89Q8N998 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC89Q8N998 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC89Q8N998 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC89Q8N998 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC89Q8N998 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC89Q8N998 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.26■□□□□ 0.67
CCDC89Q8N998 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.26■□□□□ 0.67
CCDC89Q8N998 AC026271.3-201ENST00000571884 352 ntBASIC19.26■□□□□ 0.67
CCDC89Q8N998 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC89Q8N998 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.26■□□□□ 0.67
CCDC89Q8N998 AC011298.2-201ENST00000617989 482 ntBASIC19.26■□□□□ 0.67
CCDC89Q8N998 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.26■□□□□ 0.67
CCDC89Q8N998 AL031985.4-201ENST00000642138 673 ntBASIC19.26■□□□□ 0.67
CCDC89Q8N998 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.26■□□□□ 0.67
CCDC89Q8N998 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.26■□□□□ 0.67
CCDC89Q8N998 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC89Q8N998 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC89Q8N998 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC89Q8N998 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC89Q8N998 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.26■□□□□ 0.67
CCDC89Q8N998 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCDC89Q8N998 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC89Q8N998 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CCDC89Q8N998 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC89Q8N998 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CCDC89Q8N998 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.25■□□□□ 0.67
CCDC89Q8N998 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.25■□□□□ 0.67
CCDC89Q8N998 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC89Q8N998 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC89Q8N998 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC89Q8N998 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC89Q8N998 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC89Q8N998 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
CCDC89Q8N998 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC89Q8N998 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CCDC89Q8N998 CD99P1-205ENST00000527459 561 ntBASIC19.25■□□□□ 0.67
CCDC89Q8N998 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.25■□□□□ 0.67
CCDC89Q8N998 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CCDC89Q8N998 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
CCDC89Q8N998 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CCDC89Q8N998 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC89Q8N998 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC89Q8N998 KRT8P45-201ENST00000414328 1447 ntBASIC19.25■□□□□ 0.67
CCDC89Q8N998 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CCDC89Q8N998 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCDC89Q8N998 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC89Q8N998 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC89Q8N998 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC89Q8N998 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CCDC89Q8N998 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC89Q8N998 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC89Q8N998 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC89Q8N998 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC89Q8N998 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC89Q8N998 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC89Q8N998 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CCDC89Q8N998 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC89Q8N998 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CCDC89Q8N998 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC89Q8N998 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.24■□□□□ 0.67
CCDC89Q8N998 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC89Q8N998 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC89Q8N998 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC89Q8N998 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC89Q8N998 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.24■□□□□ 0.67
CCDC89Q8N998 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC89Q8N998 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC89Q8N998 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC89Q8N998 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
CCDC89Q8N998 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC89Q8N998 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC89Q8N998 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.24■□□□□ 0.67
CCDC89Q8N998 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC89Q8N998 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC89Q8N998 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC89Q8N998 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
CCDC89Q8N998 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CCDC89Q8N998 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC89Q8N998 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC89Q8N998 AL357033.4-201ENST00000617703 1807 ntBASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms