Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 LINC01126-201ENST00000623515 1646 ntBASIC28.9■■■□□ 2.22
VPS8Q8N3P4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC28.9■■■□□ 2.22
VPS8Q8N3P4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
VPS8Q8N3P4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC28.9■■■□□ 2.22
VPS8Q8N3P4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
VPS8Q8N3P4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC28.9■■■□□ 2.22
VPS8Q8N3P4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC28.9■■■□□ 2.22
VPS8Q8N3P4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
VPS8Q8N3P4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC28.9■■■□□ 2.22
VPS8Q8N3P4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC28.9■■■□□ 2.22
VPS8Q8N3P4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC28.9■■■□□ 2.22
VPS8Q8N3P4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC28.9■■■□□ 2.22
VPS8Q8N3P4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC28.9■■■□□ 2.22
VPS8Q8N3P4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC28.9■■■□□ 2.22
VPS8Q8N3P4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC28.9■■■□□ 2.22
VPS8Q8N3P4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
VPS8Q8N3P4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
VPS8Q8N3P4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC28.9■■■□□ 2.22
VPS8Q8N3P4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC28.9■■■□□ 2.22
VPS8Q8N3P4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
VPS8Q8N3P4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
VPS8Q8N3P4 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
VPS8Q8N3P4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC28.89■■■□□ 2.22
VPS8Q8N3P4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC28.89■■■□□ 2.22
VPS8Q8N3P4 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
VPS8Q8N3P4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
VPS8Q8N3P4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC28.89■■■□□ 2.22
VPS8Q8N3P4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
VPS8Q8N3P4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
VPS8Q8N3P4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
VPS8Q8N3P4 TSPY22P-201ENST00000427496 604 ntBASIC28.89■■■□□ 2.22
VPS8Q8N3P4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC28.89■■■□□ 2.22
VPS8Q8N3P4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
VPS8Q8N3P4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC28.89■■■□□ 2.22
VPS8Q8N3P4 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC28.89■■■□□ 2.22
VPS8Q8N3P4 AL121672.3-201ENST00000608644 468 ntBASIC28.89■■■□□ 2.22
VPS8Q8N3P4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
VPS8Q8N3P4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC28.89■■■□□ 2.22
VPS8Q8N3P4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC28.89■■■□□ 2.21
VPS8Q8N3P4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC28.89■■■□□ 2.21
VPS8Q8N3P4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC28.89■■■□□ 2.21
VPS8Q8N3P4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
VPS8Q8N3P4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
VPS8Q8N3P4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
VPS8Q8N3P4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
VPS8Q8N3P4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC28.88■■■□□ 2.21
VPS8Q8N3P4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
VPS8Q8N3P4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC28.88■■■□□ 2.21
VPS8Q8N3P4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
VPS8Q8N3P4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC28.88■■■□□ 2.21
VPS8Q8N3P4 CHCHD2P8-201ENST00000429873 447 ntBASIC28.88■■■□□ 2.21
VPS8Q8N3P4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC28.88■■■□□ 2.21
VPS8Q8N3P4 AC005332.3-201ENST00000589904 676 ntBASIC28.88■■■□□ 2.21
VPS8Q8N3P4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC28.88■■■□□ 2.21
VPS8Q8N3P4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
VPS8Q8N3P4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC28.88■■■□□ 2.21
VPS8Q8N3P4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
VPS8Q8N3P4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
VPS8Q8N3P4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
VPS8Q8N3P4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC28.87■■■□□ 2.21
VPS8Q8N3P4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC28.87■■■□□ 2.21
VPS8Q8N3P4 TSSC2-201ENST00000450217 709 ntBASIC28.87■■■□□ 2.21
VPS8Q8N3P4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC28.87■■■□□ 2.21
VPS8Q8N3P4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC28.87■■■□□ 2.21
VPS8Q8N3P4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
VPS8Q8N3P4 BCL10-202ENST00000620248 774 ntTSL 5 BASIC28.87■■■□□ 2.21
VPS8Q8N3P4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC28.87■■■□□ 2.21
VPS8Q8N3P4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC28.87■■■□□ 2.21
VPS8Q8N3P4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
VPS8Q8N3P4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
VPS8Q8N3P4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
VPS8Q8N3P4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC28.87■■■□□ 2.21
VPS8Q8N3P4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC28.87■■■□□ 2.21
VPS8Q8N3P4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
VPS8Q8N3P4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
VPS8Q8N3P4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC28.86■■■□□ 2.21
VPS8Q8N3P4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
VPS8Q8N3P4 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC28.86■■■□□ 2.21
VPS8Q8N3P4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC28.86■■■□□ 2.21
VPS8Q8N3P4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
VPS8Q8N3P4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC28.86■■■□□ 2.21
VPS8Q8N3P4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
VPS8Q8N3P4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC28.86■■■□□ 2.21
VPS8Q8N3P4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
VPS8Q8N3P4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC28.86■■■□□ 2.21
VPS8Q8N3P4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC28.86■■■□□ 2.21
VPS8Q8N3P4 LINC00167-201ENST00000530583 1419 ntBASIC28.86■■■□□ 2.21
VPS8Q8N3P4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC28.86■■■□□ 2.21
VPS8Q8N3P4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
VPS8Q8N3P4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC28.86■■■□□ 2.21
VPS8Q8N3P4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC28.86■■■□□ 2.21
VPS8Q8N3P4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC28.86■■■□□ 2.21
VPS8Q8N3P4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC28.86■■■□□ 2.21
VPS8Q8N3P4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
VPS8Q8N3P4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
VPS8Q8N3P4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC28.86■■■□□ 2.21
VPS8Q8N3P4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
VPS8Q8N3P4 TPSP2-201ENST00000561760 610 ntBASIC28.86■■■□□ 2.21
VPS8Q8N3P4 AC004263.2-201ENST00000617183 678 ntBASIC28.86■■■□□ 2.21
VPS8Q8N3P4 VPS72-207ENST00000640458 689 ntTSL 5 BASIC28.86■■■□□ 2.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms