Protein–RNA interactions for Protein: Q8N1L1

LINC00528, Putative uncharacterized protein encoded by LINC00528, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00528Q8N1L1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00528Q8N1L1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00528Q8N1L1 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00528Q8N1L1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00528Q8N1L1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00528Q8N1L1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00528Q8N1L1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00528Q8N1L1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC12.29□□□□□ -0.44
LINC00528Q8N1L1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00528Q8N1L1 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 MTND1P26-201ENST00000440488 538 ntBASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 YBX1P10-201ENST00000444752 975 ntBASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 AC104076.2-201ENST00000448912 469 ntBASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 ECEL1P2-202ENST00000465689 757 ntBASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 B3GAT3P1-201ENST00000471720 806 ntBASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 HAUS1P1-201ENST00000505275 832 ntBASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 AC097488.1-201ENST00000507834 756 ntBASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 RNU6-751P-201ENST00000516382 101 ntBASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 AC010834.3-201ENST00000520562 939 ntTSL 3 BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 EGLN1P1-201ENST00000531623 762 ntBASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 AC092574.1-201ENST00000609771 420 ntBASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 AC131212.4-201ENST00000623606 975 ntBASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 AL138960.2-201ENST00000625145 535 ntBASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC12.28□□□□□ -0.44
LINC00528Q8N1L1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC12.27□□□□□ -0.44
LINC00528Q8N1L1 LGALS8-AS1-201ENST00000487567 1457 ntBASIC12.27□□□□□ -0.44
LINC00528Q8N1L1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC12.27□□□□□ -0.44
LINC00528Q8N1L1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
LINC00528Q8N1L1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00528Q8N1L1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
LINC00528Q8N1L1 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
LINC00528Q8N1L1 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC12.27□□□□□ -0.44
LINC00528Q8N1L1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.44
LINC00528Q8N1L1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00528Q8N1L1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
LINC00528Q8N1L1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
LINC00528Q8N1L1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LINC00528Q8N1L1 PHGDH-210ENST00000641115 1638 ntBASIC12.27□□□□□ -0.44
LINC00528Q8N1L1 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00528Q8N1L1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00528Q8N1L1 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00528Q8N1L1 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC12.27□□□□□ -0.45
LINC00528Q8N1L1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00528Q8N1L1 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00528Q8N1L1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00528Q8N1L1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00528Q8N1L1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00528Q8N1L1 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC12.27□□□□□ -0.45
LINC00528Q8N1L1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
LINC00528Q8N1L1 TUBB8P6-201ENST00000436895 1288 ntBASIC12.27□□□□□ -0.45
LINC00528Q8N1L1 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC12.27□□□□□ -0.45
LINC00528Q8N1L1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00528Q8N1L1 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC12.27□□□□□ -0.45
LINC00528Q8N1L1 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms