Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC27.41■■□□□ 1.98
ABCA6Q8N139 OR7E14P-202ENST00000530490 1290 ntBASIC27.41■■□□□ 1.98
ABCA6Q8N139 AC040169.1-201ENST00000565382 521 ntBASIC27.41■■□□□ 1.98
ABCA6Q8N139 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC27.4■■□□□ 1.98
ABCA6Q8N139 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
ABCA6Q8N139 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
ABCA6Q8N139 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
ABCA6Q8N139 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
ABCA6Q8N139 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
ABCA6Q8N139 AP005117.1-201ENST00000584346 1413 ntBASIC27.4■■□□□ 1.98
ABCA6Q8N139 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
ABCA6Q8N139 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
ABCA6Q8N139 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC27.4■■□□□ 1.98
ABCA6Q8N139 IMP4-203ENST00000409935 958 ntTSL 5 BASIC27.4■■□□□ 1.98
ABCA6Q8N139 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC27.4■■□□□ 1.98
ABCA6Q8N139 AC011467.2-201ENST00000598425 242 ntBASIC27.4■■□□□ 1.98
ABCA6Q8N139 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
ABCA6Q8N139 AL139288.1-201ENST00000623748 933 ntBASIC27.4■■□□□ 1.98
ABCA6Q8N139 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
ABCA6Q8N139 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
ABCA6Q8N139 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
ABCA6Q8N139 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
ABCA6Q8N139 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
ABCA6Q8N139 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
ABCA6Q8N139 AC004832.2-201ENST00000426397 482 ntBASIC27.39■■□□□ 1.98
ABCA6Q8N139 AC007967.2-201ENST00000432613 625 ntBASIC27.39■■□□□ 1.98
ABCA6Q8N139 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
ABCA6Q8N139 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC27.39■■□□□ 1.98
ABCA6Q8N139 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC27.39■■□□□ 1.98
ABCA6Q8N139 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC27.39■■□□□ 1.98
ABCA6Q8N139 UROS-202ENST00000368778 1556 ntTSL 2 BASIC27.39■■□□□ 1.97
ABCA6Q8N139 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC27.39■■□□□ 1.97
ABCA6Q8N139 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
ABCA6Q8N139 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
ABCA6Q8N139 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.97
ABCA6Q8N139 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC27.39■■□□□ 1.97
ABCA6Q8N139 RAB17-203ENST00000409576 466 ntTSL 3 BASIC27.38■■□□□ 1.97
ABCA6Q8N139 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC27.38■■□□□ 1.97
ABCA6Q8N139 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC27.38■■□□□ 1.97
ABCA6Q8N139 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC27.38■■□□□ 1.97
ABCA6Q8N139 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC27.38■■□□□ 1.97
ABCA6Q8N139 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC27.38■■□□□ 1.97
ABCA6Q8N139 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
ABCA6Q8N139 FP475955.4-201ENST00000623131 1990 ntBASIC27.38■■□□□ 1.97
ABCA6Q8N139 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC27.38■■□□□ 1.97
ABCA6Q8N139 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC27.38■■□□□ 1.97
ABCA6Q8N139 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC27.38■■□□□ 1.97
ABCA6Q8N139 DNAJB3-202ENST00000449667 1266 ntBASIC27.38■■□□□ 1.97
ABCA6Q8N139 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC27.38■■□□□ 1.97
ABCA6Q8N139 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC27.38■■□□□ 1.97
ABCA6Q8N139 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC27.38■■□□□ 1.97
ABCA6Q8N139 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
ABCA6Q8N139 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
ABCA6Q8N139 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
ABCA6Q8N139 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ABCA6Q8N139 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ABCA6Q8N139 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
ABCA6Q8N139 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ABCA6Q8N139 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
ABCA6Q8N139 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ABCA6Q8N139 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
ABCA6Q8N139 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC27.37■■□□□ 1.97
ABCA6Q8N139 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC27.37■■□□□ 1.97
ABCA6Q8N139 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC27.37■■□□□ 1.97
ABCA6Q8N139 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
ABCA6Q8N139 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
ABCA6Q8N139 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ABCA6Q8N139 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ABCA6Q8N139 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ABCA6Q8N139 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
ABCA6Q8N139 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC27.36■■□□□ 1.97
ABCA6Q8N139 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC27.36■■□□□ 1.97
ABCA6Q8N139 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
ABCA6Q8N139 HNRNPA1P28-201ENST00000424481 961 ntBASIC27.36■■□□□ 1.97
ABCA6Q8N139 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC27.36■■□□□ 1.97
ABCA6Q8N139 AC134684.3-201ENST00000641758 218 ntBASIC27.36■■□□□ 1.97
ABCA6Q8N139 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
ABCA6Q8N139 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
ABCA6Q8N139 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC27.36■■□□□ 1.97
ABCA6Q8N139 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC27.35■■□□□ 1.97
ABCA6Q8N139 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
ABCA6Q8N139 HLA-J-201ENST00000462773 1622 ntBASIC27.35■■□□□ 1.97
ABCA6Q8N139 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
ABCA6Q8N139 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC27.35■■□□□ 1.97
ABCA6Q8N139 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC27.35■■□□□ 1.97
ABCA6Q8N139 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC27.35■■□□□ 1.97
ABCA6Q8N139 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
ABCA6Q8N139 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
ABCA6Q8N139 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
ABCA6Q8N139 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
ABCA6Q8N139 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
ABCA6Q8N139 AP002414.3-201ENST00000589352 1468 ntBASIC27.35■■□□□ 1.97
ABCA6Q8N139 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
ABCA6Q8N139 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC27.35■■□□□ 1.97
ABCA6Q8N139 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
ABCA6Q8N139 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
ABCA6Q8N139 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ABCA6Q8N139 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ABCA6Q8N139 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC27.34■■□□□ 1.97
ABCA6Q8N139 ABCD1P5-201ENST00000445663 754 ntBASIC27.34■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms