Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C9orf40Q8IXQ3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
C9orf40Q8IXQ3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C9orf40Q8IXQ3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.1■□□□□ 0.33
C9orf40Q8IXQ3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.1■□□□□ 0.33
C9orf40Q8IXQ3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.1■□□□□ 0.33
C9orf40Q8IXQ3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
C9orf40Q8IXQ3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
C9orf40Q8IXQ3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
C9orf40Q8IXQ3 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C9orf40Q8IXQ3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C9orf40Q8IXQ3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
C9orf40Q8IXQ3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C9orf40Q8IXQ3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C9orf40Q8IXQ3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C9orf40Q8IXQ3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
C9orf40Q8IXQ3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C9orf40Q8IXQ3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C9orf40Q8IXQ3 AL031133.1-201ENST00000406807 723 ntBASIC17.09■□□□□ 0.33
C9orf40Q8IXQ3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C9orf40Q8IXQ3 AC009065.1-201ENST00000564055 1225 ntBASIC17.09■□□□□ 0.33
C9orf40Q8IXQ3 AC087388.1-201ENST00000571370 1112 ntBASIC17.09■□□□□ 0.33
C9orf40Q8IXQ3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.09■□□□□ 0.33
C9orf40Q8IXQ3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.09■□□□□ 0.33
C9orf40Q8IXQ3 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.09■□□□□ 0.33
C9orf40Q8IXQ3 AC083849.1-201ENST00000615227 514 ntBASIC17.09■□□□□ 0.33
C9orf40Q8IXQ3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.09■□□□□ 0.33
C9orf40Q8IXQ3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C9orf40Q8IXQ3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.09■□□□□ 0.33
C9orf40Q8IXQ3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C9orf40Q8IXQ3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.09■□□□□ 0.33
C9orf40Q8IXQ3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C9orf40Q8IXQ3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C9orf40Q8IXQ3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C9orf40Q8IXQ3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C9orf40Q8IXQ3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C9orf40Q8IXQ3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C9orf40Q8IXQ3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
C9orf40Q8IXQ3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.09■□□□□ 0.33
C9orf40Q8IXQ3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
C9orf40Q8IXQ3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.08■□□□□ 0.33
C9orf40Q8IXQ3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
C9orf40Q8IXQ3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
C9orf40Q8IXQ3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
C9orf40Q8IXQ3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
C9orf40Q8IXQ3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
C9orf40Q8IXQ3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
C9orf40Q8IXQ3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
C9orf40Q8IXQ3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
C9orf40Q8IXQ3 LINC01311-201ENST00000565162 1445 ntBASIC17.08■□□□□ 0.32
C9orf40Q8IXQ3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
C9orf40Q8IXQ3 ARMC10P1-201ENST00000313754 855 ntBASIC17.08■□□□□ 0.32
C9orf40Q8IXQ3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.08■□□□□ 0.32
C9orf40Q8IXQ3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.08■□□□□ 0.32
C9orf40Q8IXQ3 MIR149-201ENST00000384879 89 ntBASIC17.08■□□□□ 0.32
C9orf40Q8IXQ3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.08■□□□□ 0.32
C9orf40Q8IXQ3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.08■□□□□ 0.32
C9orf40Q8IXQ3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
C9orf40Q8IXQ3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
C9orf40Q8IXQ3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
C9orf40Q8IXQ3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
C9orf40Q8IXQ3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.08■□□□□ 0.32
C9orf40Q8IXQ3 WIZP1-201ENST00000531444 2299 ntBASIC17.08■□□□□ 0.32
C9orf40Q8IXQ3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
C9orf40Q8IXQ3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
C9orf40Q8IXQ3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C9orf40Q8IXQ3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C9orf40Q8IXQ3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.07■□□□□ 0.32
C9orf40Q8IXQ3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C9orf40Q8IXQ3 AC009102.3-201ENST00000623118 1491 ntBASIC17.07■□□□□ 0.32
C9orf40Q8IXQ3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
C9orf40Q8IXQ3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C9orf40Q8IXQ3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
C9orf40Q8IXQ3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
C9orf40Q8IXQ3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
C9orf40Q8IXQ3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.07■□□□□ 0.32
C9orf40Q8IXQ3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
C9orf40Q8IXQ3 HBZP1-201ENST00000354915 429 ntBASIC17.07■□□□□ 0.32
C9orf40Q8IXQ3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.07■□□□□ 0.32
C9orf40Q8IXQ3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
C9orf40Q8IXQ3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
C9orf40Q8IXQ3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
C9orf40Q8IXQ3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C9orf40Q8IXQ3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.07■□□□□ 0.32
C9orf40Q8IXQ3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C9orf40Q8IXQ3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.07■□□□□ 0.32
C9orf40Q8IXQ3 AL138781.2-201ENST00000617896 1843 ntBASIC17.07■□□□□ 0.32
C9orf40Q8IXQ3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C9orf40Q8IXQ3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
C9orf40Q8IXQ3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.07■□□□□ 0.32
C9orf40Q8IXQ3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
C9orf40Q8IXQ3 AL391807.1-203ENST00000604392 2365 ntBASIC17.07■□□□□ 0.32
C9orf40Q8IXQ3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
C9orf40Q8IXQ3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms