Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.56■□□□□ 0.72
SCN4BQ8IWT1 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.56■□□□□ 0.72
SCN4BQ8IWT1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.56■□□□□ 0.72
SCN4BQ8IWT1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCN4BQ8IWT1 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.56■□□□□ 0.72
SCN4BQ8IWT1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.56■□□□□ 0.72
SCN4BQ8IWT1 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCN4BQ8IWT1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCN4BQ8IWT1 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCN4BQ8IWT1 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.56■□□□□ 0.72
SCN4BQ8IWT1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCN4BQ8IWT1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCN4BQ8IWT1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SCN4BQ8IWT1 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SCN4BQ8IWT1 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SCN4BQ8IWT1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SCN4BQ8IWT1 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCN4BQ8IWT1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCN4BQ8IWT1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCN4BQ8IWT1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCN4BQ8IWT1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.55■□□□□ 0.72
SCN4BQ8IWT1 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SCN4BQ8IWT1 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCN4BQ8IWT1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SCN4BQ8IWT1 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.55■□□□□ 0.72
SCN4BQ8IWT1 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SCN4BQ8IWT1 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCN4BQ8IWT1 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCN4BQ8IWT1 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SCN4BQ8IWT1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SCN4BQ8IWT1 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCN4BQ8IWT1 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCN4BQ8IWT1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.55■□□□□ 0.72
SCN4BQ8IWT1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SCN4BQ8IWT1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.55■□□□□ 0.72
SCN4BQ8IWT1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCN4BQ8IWT1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SCN4BQ8IWT1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCN4BQ8IWT1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCN4BQ8IWT1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SCN4BQ8IWT1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SCN4BQ8IWT1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SCN4BQ8IWT1 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCN4BQ8IWT1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCN4BQ8IWT1 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCN4BQ8IWT1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.54■□□□□ 0.72
SCN4BQ8IWT1 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.54■□□□□ 0.72
SCN4BQ8IWT1 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.54■□□□□ 0.72
SCN4BQ8IWT1 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.54■□□□□ 0.72
SCN4BQ8IWT1 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SCN4BQ8IWT1 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.54■□□□□ 0.72
SCN4BQ8IWT1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
SCN4BQ8IWT1 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SCN4BQ8IWT1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SCN4BQ8IWT1 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.54■□□□□ 0.72
SCN4BQ8IWT1 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCN4BQ8IWT1 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.53■□□□□ 0.72
SCN4BQ8IWT1 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SCN4BQ8IWT1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.53■□□□□ 0.72
SCN4BQ8IWT1 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCN4BQ8IWT1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCN4BQ8IWT1 AC020763.4-201ENST00000623414 4170 ntBASIC19.53■□□□□ 0.72
SCN4BQ8IWT1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCN4BQ8IWT1 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCN4BQ8IWT1 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.53■□□□□ 0.72
SCN4BQ8IWT1 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCN4BQ8IWT1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCN4BQ8IWT1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.53■□□□□ 0.72
SCN4BQ8IWT1 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.53■□□□□ 0.72
SCN4BQ8IWT1 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.53■□□□□ 0.72
SCN4BQ8IWT1 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCN4BQ8IWT1 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SCN4BQ8IWT1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.53■□□□□ 0.72
SCN4BQ8IWT1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SCN4BQ8IWT1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SCN4BQ8IWT1 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
SCN4BQ8IWT1 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.52■□□□□ 0.72
SCN4BQ8IWT1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCN4BQ8IWT1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SCN4BQ8IWT1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.52■□□□□ 0.72
SCN4BQ8IWT1 KRT8P50-201ENST00000562022 1438 ntBASIC19.52■□□□□ 0.72
SCN4BQ8IWT1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SCN4BQ8IWT1 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCN4BQ8IWT1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.52■□□□□ 0.72
SCN4BQ8IWT1 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.52■□□□□ 0.72
SCN4BQ8IWT1 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCN4BQ8IWT1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SCN4BQ8IWT1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.52■□□□□ 0.72
SCN4BQ8IWT1 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCN4BQ8IWT1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.52■□□□□ 0.72
SCN4BQ8IWT1 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SCN4BQ8IWT1 HLA-F-220ENST00000434407 884 ntBASIC19.52■□□□□ 0.72
SCN4BQ8IWT1 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SCN4BQ8IWT1 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
SCN4BQ8IWT1 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.52■□□□□ 0.72
SCN4BQ8IWT1 AC069148.1-201ENST00000608741 768 ntBASIC19.52■□□□□ 0.72
SCN4BQ8IWT1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.52■□□□□ 0.72
SCN4BQ8IWT1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.52■□□□□ 0.72
SCN4BQ8IWT1 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SCN4BQ8IWT1 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms