Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC83Q8IWF9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CCDC83Q8IWF9 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC83Q8IWF9 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC83Q8IWF9 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC83Q8IWF9 AC233702.5-201ENST00000584107 538 ntBASIC21.81■■□□□ 1.08
CCDC83Q8IWF9 DGCR10-201ENST00000609839 495 ntBASIC21.81■■□□□ 1.08
CCDC83Q8IWF9 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.81■■□□□ 1.08
CCDC83Q8IWF9 AL049637.2-201ENST00000641778 930 ntBASIC21.81■■□□□ 1.08
CCDC83Q8IWF9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CCDC83Q8IWF9 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC83Q8IWF9 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC83Q8IWF9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC83Q8IWF9 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC83Q8IWF9 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CCDC83Q8IWF9 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC83Q8IWF9 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.81■■□□□ 1.08
CCDC83Q8IWF9 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC83Q8IWF9 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.81■■□□□ 1.08
CCDC83Q8IWF9 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CCDC83Q8IWF9 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
CCDC83Q8IWF9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC83Q8IWF9 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC83Q8IWF9 ESPNP-201ENST00000270691 2015 ntBASIC21.8■■□□□ 1.08
CCDC83Q8IWF9 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC83Q8IWF9 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC83Q8IWF9 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CCDC83Q8IWF9 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC83Q8IWF9 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CCDC83Q8IWF9 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC83Q8IWF9 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
CCDC83Q8IWF9 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC83Q8IWF9 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.8■■□□□ 1.08
CCDC83Q8IWF9 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC83Q8IWF9 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC83Q8IWF9 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC83Q8IWF9 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC83Q8IWF9 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC83Q8IWF9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CCDC83Q8IWF9 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC83Q8IWF9 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CCDC83Q8IWF9 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC83Q8IWF9 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC83Q8IWF9 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC83Q8IWF9 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC83Q8IWF9 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC83Q8IWF9 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CCDC83Q8IWF9 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC83Q8IWF9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC83Q8IWF9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC83Q8IWF9 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC83Q8IWF9 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC83Q8IWF9 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC83Q8IWF9 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC83Q8IWF9 AC012618.2-201ENST00000428058 849 ntBASIC21.79■■□□□ 1.08
CCDC83Q8IWF9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.79■■□□□ 1.08
CCDC83Q8IWF9 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.79■■□□□ 1.08
CCDC83Q8IWF9 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CCDC83Q8IWF9 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC83Q8IWF9 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC83Q8IWF9 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC83Q8IWF9 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC83Q8IWF9 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC83Q8IWF9 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC83Q8IWF9 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC83Q8IWF9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC83Q8IWF9 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC83Q8IWF9 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC83Q8IWF9 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC83Q8IWF9 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC83Q8IWF9 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CCDC83Q8IWF9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CCDC83Q8IWF9 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.78■■□□□ 1.08
CCDC83Q8IWF9 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CCDC83Q8IWF9 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC83Q8IWF9 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC83Q8IWF9 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC83Q8IWF9 MIR564-202ENST00000385049 94 ntBASIC21.78■■□□□ 1.08
CCDC83Q8IWF9 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC83Q8IWF9 CRYGFP-201ENST00000418459 633 ntBASIC21.78■■□□□ 1.08
CCDC83Q8IWF9 MCCD1P1-208ENST00000445732 328 ntBASIC21.78■■□□□ 1.08
CCDC83Q8IWF9 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CCDC83Q8IWF9 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC83Q8IWF9 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC83Q8IWF9 Z99916.2-201ENST00000604037 246 ntBASIC21.78■■□□□ 1.08
CCDC83Q8IWF9 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC83Q8IWF9 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC83Q8IWF9 PCDHB18P-201ENST00000524813 2368 ntBASIC21.78■■□□□ 1.08
CCDC83Q8IWF9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
CCDC83Q8IWF9 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CCDC83Q8IWF9 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC83Q8IWF9 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC83Q8IWF9 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.78■■□□□ 1.08
CCDC83Q8IWF9 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC83Q8IWF9 AC067852.2-201ENST00000590513 2313 ntBASIC21.78■■□□□ 1.08
CCDC83Q8IWF9 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC83Q8IWF9 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC83Q8IWF9 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC83Q8IWF9 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC83Q8IWF9 AC093677.2-201ENST00000600169 1863 ntBASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms