Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 AC116562.2-201ENST00000507042 360 ntBASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 AC097488.1-201ENST00000507834 756 ntBASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 AC233702.5-201ENST00000584107 538 ntBASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 AP001412.1-201ENST00000608405 714 ntBASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 REXO1L10P-201ENST00000615707 1290 ntBASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 REXO1L12P-201ENST00000622156 912 ntBASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
LINC00346Q8IVM7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 AC096733.2-201ENST00000609937 1394 ntBASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 AL355355.2-201ENST00000442321 338 ntBASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 DGCR10-201ENST00000609839 495 ntBASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00346Q8IVM7 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 CRYGFP-201ENST00000418459 633 ntBASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 Z99916.2-201ENST00000604037 246 ntBASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 AC026471.5-201ENST00000615068 467 ntBASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 AC112777.1-201ENST00000540175 1423 ntBASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00346Q8IVM7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms