Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC50Q8IVM0 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC50Q8IVM0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.59■□□□□ 0.73
CCDC50Q8IVM0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC50Q8IVM0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC50Q8IVM0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.59■□□□□ 0.73
CCDC50Q8IVM0 RPPH1-201ENST00000516869 333 ntBASIC19.59■□□□□ 0.73
CCDC50Q8IVM0 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.59■□□□□ 0.73
CCDC50Q8IVM0 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC50Q8IVM0 MTMR9LP-203ENST00000426597 1545 ntBASIC19.59■□□□□ 0.73
CCDC50Q8IVM0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC50Q8IVM0 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
CCDC50Q8IVM0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CCDC50Q8IVM0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CCDC50Q8IVM0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC50Q8IVM0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC50Q8IVM0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC50Q8IVM0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC50Q8IVM0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.59■□□□□ 0.73
CCDC50Q8IVM0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC50Q8IVM0 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CCDC50Q8IVM0 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.59■□□□□ 0.73
CCDC50Q8IVM0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC50Q8IVM0 PRORSD1P-202ENST00000563365 2154 ntBASIC19.59■□□□□ 0.73
CCDC50Q8IVM0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC50Q8IVM0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC50Q8IVM0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC50Q8IVM0 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.58■□□□□ 0.73
CCDC50Q8IVM0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC50Q8IVM0 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC50Q8IVM0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC50Q8IVM0 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
CCDC50Q8IVM0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CCDC50Q8IVM0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC50Q8IVM0 AC011298.2-201ENST00000617989 482 ntBASIC19.58■□□□□ 0.72
CCDC50Q8IVM0 FAM197Y4-202ENST00000622692 608 ntBASIC19.58■□□□□ 0.72
CCDC50Q8IVM0 AC068587.9-201ENST00000641814 219 ntBASIC19.58■□□□□ 0.72
CCDC50Q8IVM0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC50Q8IVM0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC50Q8IVM0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC50Q8IVM0 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC50Q8IVM0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC50Q8IVM0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC50Q8IVM0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.58■□□□□ 0.72
CCDC50Q8IVM0 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC50Q8IVM0 AC073592.3-201ENST00000625118 1834 ntBASIC19.58■□□□□ 0.72
CCDC50Q8IVM0 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CCDC50Q8IVM0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC50Q8IVM0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC50Q8IVM0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC50Q8IVM0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC50Q8IVM0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC50Q8IVM0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC50Q8IVM0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC50Q8IVM0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CCDC50Q8IVM0 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC50Q8IVM0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC50Q8IVM0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC50Q8IVM0 AL354751.1-201ENST00000412768 1863 ntBASIC19.57■□□□□ 0.72
CCDC50Q8IVM0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC50Q8IVM0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC50Q8IVM0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC50Q8IVM0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC50Q8IVM0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC50Q8IVM0 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC50Q8IVM0 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC50Q8IVM0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC50Q8IVM0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC50Q8IVM0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.57■□□□□ 0.72
CCDC50Q8IVM0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC50Q8IVM0 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC50Q8IVM0 AL031985.4-201ENST00000642138 673 ntBASIC19.57■□□□□ 0.72
CCDC50Q8IVM0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC50Q8IVM0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC50Q8IVM0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC50Q8IVM0 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC50Q8IVM0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC50Q8IVM0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC50Q8IVM0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC50Q8IVM0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC50Q8IVM0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC50Q8IVM0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC50Q8IVM0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC50Q8IVM0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CCDC50Q8IVM0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC50Q8IVM0 KRT8P32-201ENST00000512863 1461 ntBASIC19.56■□□□□ 0.72
CCDC50Q8IVM0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC50Q8IVM0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC50Q8IVM0 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.56■□□□□ 0.72
CCDC50Q8IVM0 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC50Q8IVM0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.56■□□□□ 0.72
CCDC50Q8IVM0 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CCDC50Q8IVM0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC50Q8IVM0 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC50Q8IVM0 KRT8P3-201ENST00000519669 1449 ntBASIC19.56■□□□□ 0.72
CCDC50Q8IVM0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC50Q8IVM0 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC50Q8IVM0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.56■□□□□ 0.72
CCDC50Q8IVM0 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC50Q8IVM0 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms