Protein–RNA interactions for Protein: Q8IUA7

ABCA9, ATP-binding cassette sub-family A member 9, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9Q8IUA7 AL356309.3-201ENST00000624132 1934 ntBASIC28.12■■■□□ 2.09
ABCA9Q8IUA7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ABCA9Q8IUA7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ABCA9Q8IUA7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ABCA9Q8IUA7 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ABCA9Q8IUA7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
ABCA9Q8IUA7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC28.11■■■□□ 2.09
ABCA9Q8IUA7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
ABCA9Q8IUA7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ABCA9Q8IUA7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC28.11■■■□□ 2.09
ABCA9Q8IUA7 FP475955.4-201ENST00000623131 1990 ntBASIC28.11■■■□□ 2.09
ABCA9Q8IUA7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC28.11■■■□□ 2.09
ABCA9Q8IUA7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC28.11■■■□□ 2.09
ABCA9Q8IUA7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
ABCA9Q8IUA7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ABCA9Q8IUA7 MIR149-201ENST00000384879 89 ntBASIC28.1■■■□□ 2.09
ABCA9Q8IUA7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
ABCA9Q8IUA7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC28.1■■■□□ 2.09
ABCA9Q8IUA7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC28.1■■■□□ 2.09
ABCA9Q8IUA7 METTL21AP1-201ENST00000438852 635 ntBASIC28.1■■■□□ 2.09
ABCA9Q8IUA7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
ABCA9Q8IUA7 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
ABCA9Q8IUA7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC28.1■■■□□ 2.09
ABCA9Q8IUA7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC28.1■■■□□ 2.09
ABCA9Q8IUA7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
ABCA9Q8IUA7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC28.1■■■□□ 2.09
ABCA9Q8IUA7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC28.1■■■□□ 2.09
ABCA9Q8IUA7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
ABCA9Q8IUA7 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
ABCA9Q8IUA7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
ABCA9Q8IUA7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC28.1■■■□□ 2.09
ABCA9Q8IUA7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC28.1■■■□□ 2.09
ABCA9Q8IUA7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
ABCA9Q8IUA7 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
ABCA9Q8IUA7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
ABCA9Q8IUA7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
ABCA9Q8IUA7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC28.09■■■□□ 2.09
ABCA9Q8IUA7 AL163051.1-201ENST00000569214 1512 ntBASIC28.09■■■□□ 2.09
ABCA9Q8IUA7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC28.09■■■□□ 2.09
ABCA9Q8IUA7 AC068472.1-201ENST00000474589 881 ntBASIC28.09■■■□□ 2.09
ABCA9Q8IUA7 ALG1L5P-201ENST00000482043 771 ntBASIC28.09■■■□□ 2.09
ABCA9Q8IUA7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC28.09■■■□□ 2.09
ABCA9Q8IUA7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC28.09■■■□□ 2.09
ABCA9Q8IUA7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC28.09■■■□□ 2.09
ABCA9Q8IUA7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC28.09■■■□□ 2.09
ABCA9Q8IUA7 MIR3687-2-201ENST00000577708 61 ntBASIC28.09■■■□□ 2.09
ABCA9Q8IUA7 MIR3687-1-201ENST00000614492 61 ntBASIC28.09■■■□□ 2.09
ABCA9Q8IUA7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
ABCA9Q8IUA7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC28.08■■■□□ 2.09
ABCA9Q8IUA7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
ABCA9Q8IUA7 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
ABCA9Q8IUA7 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC28.08■■■□□ 2.09
ABCA9Q8IUA7 RFPL4AP1-201ENST00000530883 850 ntBASIC28.08■■■□□ 2.09
ABCA9Q8IUA7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC28.08■■■□□ 2.09
ABCA9Q8IUA7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC28.08■■■□□ 2.09
ABCA9Q8IUA7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
ABCA9Q8IUA7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
ABCA9Q8IUA7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
ABCA9Q8IUA7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC28.07■■■□□ 2.08
ABCA9Q8IUA7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
ABCA9Q8IUA7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
ABCA9Q8IUA7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
ABCA9Q8IUA7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
ABCA9Q8IUA7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
ABCA9Q8IUA7 AC009947.1-201ENST00000444350 727 ntBASIC28.07■■■□□ 2.08
ABCA9Q8IUA7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC28.07■■■□□ 2.08
ABCA9Q8IUA7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC28.07■■■□□ 2.08
ABCA9Q8IUA7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC28.07■■■□□ 2.08
ABCA9Q8IUA7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC28.07■■■□□ 2.08
ABCA9Q8IUA7 MTDHP4-201ENST00000600287 670 ntBASIC28.07■■■□□ 2.08
ABCA9Q8IUA7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC28.07■■■□□ 2.08
ABCA9Q8IUA7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC28.07■■■□□ 2.08
ABCA9Q8IUA7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
ABCA9Q8IUA7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC28.07■■■□□ 2.08
ABCA9Q8IUA7 AL024508.2-201ENST00000607749 1894 ntBASIC28.07■■■□□ 2.08
ABCA9Q8IUA7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
ABCA9Q8IUA7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC28.07■■■□□ 2.08
ABCA9Q8IUA7 CYMP-203ENST00000474680 1263 ntBASIC28.07■■■□□ 2.08
ABCA9Q8IUA7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC28.07■■■□□ 2.08
ABCA9Q8IUA7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
ABCA9Q8IUA7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
ABCA9Q8IUA7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
ABCA9Q8IUA7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
ABCA9Q8IUA7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
ABCA9Q8IUA7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
ABCA9Q8IUA7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
ABCA9Q8IUA7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC28.06■■■□□ 2.08
ABCA9Q8IUA7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC28.06■■■□□ 2.08
ABCA9Q8IUA7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC28.06■■■□□ 2.08
ABCA9Q8IUA7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC28.06■■■□□ 2.08
ABCA9Q8IUA7 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC28.06■■■□□ 2.08
ABCA9Q8IUA7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC28.06■■■□□ 2.08
ABCA9Q8IUA7 COX5A-204ENST00000567270 579 ntTSL 3 BASIC28.06■■■□□ 2.08
ABCA9Q8IUA7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
ABCA9Q8IUA7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
ABCA9Q8IUA7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
ABCA9Q8IUA7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC28.06■■■□□ 2.08
ABCA9Q8IUA7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
ABCA9Q8IUA7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
ABCA9Q8IUA7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC28.05■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms