Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFX6Q8HWS3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFX6Q8HWS3 KRT8P45-201ENST00000414328 1447 ntBASIC19.32■□□□□ 0.68
RFX6Q8HWS3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFX6Q8HWS3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.32■□□□□ 0.68
RFX6Q8HWS3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFX6Q8HWS3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RFX6Q8HWS3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.32■□□□□ 0.68
RFX6Q8HWS3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RFX6Q8HWS3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX6Q8HWS3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX6Q8HWS3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RFX6Q8HWS3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RFX6Q8HWS3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
RFX6Q8HWS3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX6Q8HWS3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX6Q8HWS3 AL354751.1-201ENST00000412768 1863 ntBASIC19.31■□□□□ 0.68
RFX6Q8HWS3 GPAT2P1-201ENST00000444924 1672 ntBASIC19.31■□□□□ 0.68
RFX6Q8HWS3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RFX6Q8HWS3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.31■□□□□ 0.68
RFX6Q8HWS3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RFX6Q8HWS3 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RFX6Q8HWS3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.31■□□□□ 0.68
RFX6Q8HWS3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
RFX6Q8HWS3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RFX6Q8HWS3 MCCD1P1-208ENST00000445732 328 ntBASIC19.31■□□□□ 0.68
RFX6Q8HWS3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.31■□□□□ 0.68
RFX6Q8HWS3 AC008550.1-201ENST00000511500 884 ntBASIC19.31■□□□□ 0.68
RFX6Q8HWS3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.31■□□□□ 0.68
RFX6Q8HWS3 AP003071.4-201ENST00000562276 1284 ntBASIC19.31■□□□□ 0.68
RFX6Q8HWS3 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.31■□□□□ 0.68
RFX6Q8HWS3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.31■□□□□ 0.68
RFX6Q8HWS3 TMEM191A-211ENST00000637163 1067 ntBASIC19.31■□□□□ 0.68
RFX6Q8HWS3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX6Q8HWS3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.31■□□□□ 0.68
RFX6Q8HWS3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RFX6Q8HWS3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX6Q8HWS3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RFX6Q8HWS3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RFX6Q8HWS3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
RFX6Q8HWS3 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.31■□□□□ 0.68
RFX6Q8HWS3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFX6Q8HWS3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
RFX6Q8HWS3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX6Q8HWS3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.3■□□□□ 0.68
RFX6Q8HWS3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX6Q8HWS3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX6Q8HWS3 AC079598.2-202ENST00000546624 1451 ntBASIC19.3■□□□□ 0.68
RFX6Q8HWS3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX6Q8HWS3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
RFX6Q8HWS3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX6Q8HWS3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX6Q8HWS3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RFX6Q8HWS3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RFX6Q8HWS3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX6Q8HWS3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RFX6Q8HWS3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX6Q8HWS3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.3■□□□□ 0.68
RFX6Q8HWS3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.3■□□□□ 0.68
RFX6Q8HWS3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RFX6Q8HWS3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.3■□□□□ 0.68
RFX6Q8HWS3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX6Q8HWS3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
RFX6Q8HWS3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RFX6Q8HWS3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RFX6Q8HWS3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.3■□□□□ 0.68
RFX6Q8HWS3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.3■□□□□ 0.68
RFX6Q8HWS3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFX6Q8HWS3 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RFX6Q8HWS3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX6Q8HWS3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RFX6Q8HWS3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFX6Q8HWS3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
RFX6Q8HWS3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFX6Q8HWS3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX6Q8HWS3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX6Q8HWS3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX6Q8HWS3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX6Q8HWS3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX6Q8HWS3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
RFX6Q8HWS3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFX6Q8HWS3 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RFX6Q8HWS3 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.29■□□□□ 0.68
RFX6Q8HWS3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.29■□□□□ 0.68
RFX6Q8HWS3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX6Q8HWS3 MIR718-201ENST00000390190 70 ntBASIC19.29■□□□□ 0.68
RFX6Q8HWS3 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX6Q8HWS3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.29■□□□□ 0.68
RFX6Q8HWS3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.29■□□□□ 0.68
RFX6Q8HWS3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.29■□□□□ 0.68
RFX6Q8HWS3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.29■□□□□ 0.68
RFX6Q8HWS3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX6Q8HWS3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
RFX6Q8HWS3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX6Q8HWS3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX6Q8HWS3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX6Q8HWS3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFX6Q8HWS3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RFX6Q8HWS3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX6Q8HWS3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms