Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM50Q86XT4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM50Q86XT4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM50Q86XT4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRIM50Q86XT4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TRIM50Q86XT4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM50Q86XT4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM50Q86XT4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.66■□□□□ 0.9
TRIM50Q86XT4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM50Q86XT4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM50Q86XT4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TRIM50Q86XT4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM50Q86XT4 CHCHD2P8-201ENST00000429873 447 ntBASIC20.66■□□□□ 0.9
TRIM50Q86XT4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.66■□□□□ 0.9
TRIM50Q86XT4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.66■□□□□ 0.9
TRIM50Q86XT4 MIR3652-201ENST00000579335 131 ntBASIC20.66■□□□□ 0.9
TRIM50Q86XT4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.66■□□□□ 0.9
TRIM50Q86XT4 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.66■□□□□ 0.9
TRIM50Q86XT4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM50Q86XT4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM50Q86XT4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM50Q86XT4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM50Q86XT4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
TRIM50Q86XT4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.66■□□□□ 0.9
TRIM50Q86XT4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM50Q86XT4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.66■□□□□ 0.9
TRIM50Q86XT4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM50Q86XT4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.66■□□□□ 0.9
TRIM50Q86XT4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRIM50Q86XT4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TRIM50Q86XT4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM50Q86XT4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM50Q86XT4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM50Q86XT4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIM50Q86XT4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRIM50Q86XT4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRIM50Q86XT4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TRIM50Q86XT4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM50Q86XT4 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM50Q86XT4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TRIM50Q86XT4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM50Q86XT4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIM50Q86XT4 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM50Q86XT4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIM50Q86XT4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.65■□□□□ 0.9
TRIM50Q86XT4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.65■□□□□ 0.9
TRIM50Q86XT4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
TRIM50Q86XT4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.65■□□□□ 0.9
TRIM50Q86XT4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM50Q86XT4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM50Q86XT4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM50Q86XT4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM50Q86XT4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRIM50Q86XT4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIM50Q86XT4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.65■□□□□ 0.9
TRIM50Q86XT4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.64■□□□□ 0.9
TRIM50Q86XT4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
TRIM50Q86XT4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM50Q86XT4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRIM50Q86XT4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM50Q86XT4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM50Q86XT4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TRIM50Q86XT4 KRT18P1-202ENST00000452408 1331 ntBASIC20.64■□□□□ 0.89
TRIM50Q86XT4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM50Q86XT4 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM50Q86XT4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM50Q86XT4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM50Q86XT4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM50Q86XT4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM50Q86XT4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM50Q86XT4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM50Q86XT4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
TRIM50Q86XT4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.64■□□□□ 0.89
TRIM50Q86XT4 PRELID1P1-202ENST00000567272 903 ntBASIC20.64■□□□□ 0.89
TRIM50Q86XT4 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
TRIM50Q86XT4 AC005332.3-201ENST00000589904 676 ntBASIC20.64■□□□□ 0.89
TRIM50Q86XT4 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.64■□□□□ 0.89
TRIM50Q86XT4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM50Q86XT4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.64■□□□□ 0.89
TRIM50Q86XT4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.63■□□□□ 0.89
TRIM50Q86XT4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM50Q86XT4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM50Q86XT4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM50Q86XT4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.63■□□□□ 0.89
TRIM50Q86XT4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TRIM50Q86XT4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM50Q86XT4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TRIM50Q86XT4 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM50Q86XT4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM50Q86XT4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TRIM50Q86XT4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM50Q86XT4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM50Q86XT4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM50Q86XT4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.63■□□□□ 0.89
TRIM50Q86XT4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM50Q86XT4 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.63■□□□□ 0.89
TRIM50Q86XT4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.63■□□□□ 0.89
TRIM50Q86XT4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.63■□□□□ 0.89
TRIM50Q86XT4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
TRIM50Q86XT4 AP003733.1-201ENST00000491725 852 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms