Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TUBA1AQ71U36 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TUBA1AQ71U36 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA1AQ71U36 LINC00896-202ENST00000609602 2128 ntBASIC17.12■□□□□ 0.33
TUBA1AQ71U36 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
TUBA1AQ71U36 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA1AQ71U36 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA1AQ71U36 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA1AQ71U36 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA1AQ71U36 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA1AQ71U36 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA1AQ71U36 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.12■□□□□ 0.33
TUBA1AQ71U36 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.12■□□□□ 0.33
TUBA1AQ71U36 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.12■□□□□ 0.33
TUBA1AQ71U36 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.12■□□□□ 0.33
TUBA1AQ71U36 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.12■□□□□ 0.33
TUBA1AQ71U36 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA1AQ71U36 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA1AQ71U36 AC099398.1-201ENST00000567919 2776 ntBASIC17.12■□□□□ 0.33
TUBA1AQ71U36 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.12■□□□□ 0.33
TUBA1AQ71U36 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
TUBA1AQ71U36 AC141586.5-201ENST00000624546 2050 ntBASIC17.12■□□□□ 0.33
TUBA1AQ71U36 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA1AQ71U36 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TUBA1AQ71U36 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA1AQ71U36 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA1AQ71U36 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA1AQ71U36 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.12■□□□□ 0.33
TUBA1AQ71U36 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.12■□□□□ 0.33
TUBA1AQ71U36 AC073592.3-201ENST00000625118 1834 ntBASIC17.12■□□□□ 0.33
TUBA1AQ71U36 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TUBA1AQ71U36 GNAS-203ENST00000306120 1878 ntBASIC17.12■□□□□ 0.33
TUBA1AQ71U36 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.11■□□□□ 0.33
TUBA1AQ71U36 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA1AQ71U36 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.11■□□□□ 0.33
TUBA1AQ71U36 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.11■□□□□ 0.33
TUBA1AQ71U36 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.11■□□□□ 0.33
TUBA1AQ71U36 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TUBA1AQ71U36 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA1AQ71U36 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.11■□□□□ 0.33
TUBA1AQ71U36 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.11■□□□□ 0.33
TUBA1AQ71U36 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TUBA1AQ71U36 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA1AQ71U36 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA1AQ71U36 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.11■□□□□ 0.33
TUBA1AQ71U36 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA1AQ71U36 KRT16P5-201ENST00000455284 522 ntBASIC17.11■□□□□ 0.33
TUBA1AQ71U36 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA1AQ71U36 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.11■□□□□ 0.33
TUBA1AQ71U36 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA1AQ71U36 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.11■□□□□ 0.33
TUBA1AQ71U36 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA1AQ71U36 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.11■□□□□ 0.33
TUBA1AQ71U36 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TUBA1AQ71U36 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.11■□□□□ 0.33
TUBA1AQ71U36 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA1AQ71U36 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA1AQ71U36 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA1AQ71U36 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.11■□□□□ 0.33
TUBA1AQ71U36 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TUBA1AQ71U36 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA1AQ71U36 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TUBA1AQ71U36 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA1AQ71U36 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TUBA1AQ71U36 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TUBA1AQ71U36 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TUBA1AQ71U36 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA1AQ71U36 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA1AQ71U36 ANO7L1-203ENST00000602586 1720 ntBASIC17.1■□□□□ 0.33
TUBA1AQ71U36 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA1AQ71U36 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA1AQ71U36 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA1AQ71U36 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA1AQ71U36 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA1AQ71U36 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.1■□□□□ 0.33
TUBA1AQ71U36 AC008550.1-201ENST00000511500 884 ntBASIC17.1■□□□□ 0.33
TUBA1AQ71U36 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA1AQ71U36 AC126763.1-201ENST00000552015 2118 ntBASIC17.1■□□□□ 0.33
TUBA1AQ71U36 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.1■□□□□ 0.33
TUBA1AQ71U36 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.1■□□□□ 0.33
TUBA1AQ71U36 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA1AQ71U36 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TUBA1AQ71U36 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA1AQ71U36 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA1AQ71U36 HTR7P1-201ENST00000538670 1336 ntBASIC17.1■□□□□ 0.33
TUBA1AQ71U36 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA1AQ71U36 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA1AQ71U36 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA1AQ71U36 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.1■□□□□ 0.33
TUBA1AQ71U36 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.1■□□□□ 0.33
TUBA1AQ71U36 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TUBA1AQ71U36 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TUBA1AQ71U36 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms