Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LCA10Q71F78 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LCA10Q71F78 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
LCA10Q71F78 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LCA10Q71F78 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LCA10Q71F78 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
LCA10Q71F78 PID1-202ENST00000392054 2745 ntTSL 2 BASIC10.02□□□□□ -0.81
LCA10Q71F78 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LCA10Q71F78 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LCA10Q71F78 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
LCA10Q71F78 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
LCA10Q71F78 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LCA10Q71F78 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LCA10Q71F78 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LCA10Q71F78 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LCA10Q71F78 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LCA10Q71F78 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LCA10Q71F78 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC10.02□□□□□ -0.81
LCA10Q71F78 AC008764.6-201ENST00000595909 2069 ntBASIC10.02□□□□□ -0.81
LCA10Q71F78 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LCA10Q71F78 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC10.02□□□□□ -0.81
LCA10Q71F78 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
LCA10Q71F78 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
LCA10Q71F78 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LCA10Q71F78 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC10.01□□□□□ -0.81
LCA10Q71F78 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LCA10Q71F78 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LCA10Q71F78 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LCA10Q71F78 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LCA10Q71F78 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
LCA10Q71F78 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LCA10Q71F78 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LCA10Q71F78 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC10.01□□□□□ -0.81
LCA10Q71F78 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
LCA10Q71F78 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
LCA10Q71F78 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC10.01□□□□□ -0.81
LCA10Q71F78 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LCA10Q71F78 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
LCA10Q71F78 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC10.01□□□□□ -0.81
LCA10Q71F78 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LCA10Q71F78 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
LCA10Q71F78 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LCA10Q71F78 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LCA10Q71F78 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LCA10Q71F78 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
LCA10Q71F78 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
LCA10Q71F78 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC10.01□□□□□ -0.81
LCA10Q71F78 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LCA10Q71F78 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LCA10Q71F78 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC10.01□□□□□ -0.81
LCA10Q71F78 NALT1-201ENST00000429224 738 ntTSL 5 BASIC10.01□□□□□ -0.81
LCA10Q71F78 AC010141.2-201ENST00000452426 721 ntBASIC10.01□□□□□ -0.81
LCA10Q71F78 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LCA10Q71F78 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC10.01□□□□□ -0.81
LCA10Q71F78 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC10.01□□□□□ -0.81
LCA10Q71F78 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
LCA10Q71F78 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LCA10Q71F78 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
LCA10Q71F78 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC10.01□□□□□ -0.81
LCA10Q71F78 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC10.01□□□□□ -0.81
LCA10Q71F78 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LCA10Q71F78 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LCA10Q71F78 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC10.01□□□□□ -0.81
LCA10Q71F78 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LCA10Q71F78 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LCA10Q71F78 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LCA10Q71F78 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
LCA10Q71F78 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
LCA10Q71F78 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LCA10Q71F78 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
LCA10Q71F78 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LCA10Q71F78 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LCA10Q71F78 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC10.01□□□□□ -0.81
LCA10Q71F78 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LCA10Q71F78 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC10.01□□□□□ -0.81
LCA10Q71F78 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
LCA10Q71F78 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LCA10Q71F78 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC10.01□□□□□ -0.81
LCA10Q71F78 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LCA10Q71F78 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC10.01□□□□□ -0.81
LCA10Q71F78 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC10□□□□□ -0.81
LCA10Q71F78 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC10□□□□□ -0.81
LCA10Q71F78 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC10□□□□□ -0.81
LCA10Q71F78 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC10□□□□□ -0.81
LCA10Q71F78 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC10□□□□□ -0.81
LCA10Q71F78 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LCA10Q71F78 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC10□□□□□ -0.81
LCA10Q71F78 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LCA10Q71F78 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LCA10Q71F78 LINC02199-201ENST00000506655 2702 ntBASIC10□□□□□ -0.81
LCA10Q71F78 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
LCA10Q71F78 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
LCA10Q71F78 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC10□□□□□ -0.81
LCA10Q71F78 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC10□□□□□ -0.81
LCA10Q71F78 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LCA10Q71F78 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC10□□□□□ -0.81
LCA10Q71F78 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
LCA10Q71F78 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC10□□□□□ -0.81
LCA10Q71F78 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC10□□□□□ -0.81
LCA10Q71F78 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC10□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms