Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.1■□□□□ 0.33
PTCHD4Q6ZW05 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTCHD4Q6ZW05 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
PTCHD4Q6ZW05 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PTCHD4Q6ZW05 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCHD4Q6ZW05 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCHD4Q6ZW05 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCHD4Q6ZW05 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCHD4Q6ZW05 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
PTCHD4Q6ZW05 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTCHD4Q6ZW05 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PTCHD4Q6ZW05 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCHD4Q6ZW05 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCHD4Q6ZW05 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.09■□□□□ 0.33
PTCHD4Q6ZW05 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
PTCHD4Q6ZW05 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PTCHD4Q6ZW05 C1QL1P1-201ENST00000568105 661 ntBASIC17.09■□□□□ 0.33
PTCHD4Q6ZW05 MTDHP1-201ENST00000605323 784 ntBASIC17.09■□□□□ 0.33
PTCHD4Q6ZW05 AC069544.1-201ENST00000609399 999 ntBASIC17.09■□□□□ 0.33
PTCHD4Q6ZW05 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
PTCHD4Q6ZW05 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.09■□□□□ 0.33
PTCHD4Q6ZW05 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
PTCHD4Q6ZW05 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCHD4Q6ZW05 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCHD4Q6ZW05 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCHD4Q6ZW05 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.09■□□□□ 0.33
PTCHD4Q6ZW05 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.09■□□□□ 0.33
PTCHD4Q6ZW05 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PTCHD4Q6ZW05 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCHD4Q6ZW05 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PTCHD4Q6ZW05 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PTCHD4Q6ZW05 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTCHD4Q6ZW05 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTCHD4Q6ZW05 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
PTCHD4Q6ZW05 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PTCHD4Q6ZW05 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.08■□□□□ 0.33
PTCHD4Q6ZW05 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PTCHD4Q6ZW05 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PTCHD4Q6ZW05 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTCHD4Q6ZW05 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.08■□□□□ 0.32
PTCHD4Q6ZW05 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PTCHD4Q6ZW05 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.08■□□□□ 0.32
PTCHD4Q6ZW05 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PTCHD4Q6ZW05 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
PTCHD4Q6ZW05 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PTCHD4Q6ZW05 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PTCHD4Q6ZW05 ID1-201ENST00000376105 1233 ntBASIC17.08■□□□□ 0.32
PTCHD4Q6ZW05 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PTCHD4Q6ZW05 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.08■□□□□ 0.32
PTCHD4Q6ZW05 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTCHD4Q6ZW05 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.08■□□□□ 0.32
PTCHD4Q6ZW05 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.08■□□□□ 0.32
PTCHD4Q6ZW05 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PTCHD4Q6ZW05 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTCHD4Q6ZW05 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTCHD4Q6ZW05 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTCHD4Q6ZW05 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PTCHD4Q6ZW05 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTCHD4Q6ZW05 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PTCHD4Q6ZW05 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
PTCHD4Q6ZW05 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PTCHD4Q6ZW05 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
PTCHD4Q6ZW05 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.07■□□□□ 0.32
PTCHD4Q6ZW05 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTCHD4Q6ZW05 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTCHD4Q6ZW05 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTCHD4Q6ZW05 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTCHD4Q6ZW05 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.07■□□□□ 0.32
PTCHD4Q6ZW05 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
PTCHD4Q6ZW05 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTCHD4Q6ZW05 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTCHD4Q6ZW05 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTCHD4Q6ZW05 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTCHD4Q6ZW05 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.07■□□□□ 0.32
PTCHD4Q6ZW05 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
PTCHD4Q6ZW05 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
PTCHD4Q6ZW05 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTCHD4Q6ZW05 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.07■□□□□ 0.32
PTCHD4Q6ZW05 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTCHD4Q6ZW05 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTCHD4Q6ZW05 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.07■□□□□ 0.32
PTCHD4Q6ZW05 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTCHD4Q6ZW05 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.07■□□□□ 0.32
PTCHD4Q6ZW05 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTCHD4Q6ZW05 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PTCHD4Q6ZW05 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTCHD4Q6ZW05 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTCHD4Q6ZW05 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.07■□□□□ 0.32
PTCHD4Q6ZW05 HEIH-201ENST00000623091 1652 ntBASIC17.07■□□□□ 0.32
PTCHD4Q6ZW05 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PTCHD4Q6ZW05 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.06■□□□□ 0.32
PTCHD4Q6ZW05 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms