Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
C11orf88Q6PI97 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
C11orf88Q6PI97 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
C11orf88Q6PI97 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.16■□□□□ 0.18
C11orf88Q6PI97 PNMA6B-201ENST00000538162 1200 ntBASIC16.16■□□□□ 0.18
C11orf88Q6PI97 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
C11orf88Q6PI97 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
C11orf88Q6PI97 AC092368.3-202ENST00000574180 1591 ntBASIC16.16■□□□□ 0.18
C11orf88Q6PI97 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
C11orf88Q6PI97 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
C11orf88Q6PI97 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
C11orf88Q6PI97 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
C11orf88Q6PI97 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
C11orf88Q6PI97 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C11orf88Q6PI97 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C11orf88Q6PI97 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
C11orf88Q6PI97 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C11orf88Q6PI97 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C11orf88Q6PI97 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
C11orf88Q6PI97 AL512353.2-201ENST00000448759 1962 ntBASIC16.15■□□□□ 0.18
C11orf88Q6PI97 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C11orf88Q6PI97 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.15■□□□□ 0.18
C11orf88Q6PI97 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
C11orf88Q6PI97 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C11orf88Q6PI97 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C11orf88Q6PI97 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
C11orf88Q6PI97 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
C11orf88Q6PI97 UBE2SP1-201ENST00000450587 669 ntBASIC16.15■□□□□ 0.18
C11orf88Q6PI97 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
C11orf88Q6PI97 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.15■□□□□ 0.18
C11orf88Q6PI97 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC16.15■□□□□ 0.18
C11orf88Q6PI97 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C11orf88Q6PI97 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C11orf88Q6PI97 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
C11orf88Q6PI97 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C11orf88Q6PI97 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
C11orf88Q6PI97 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C11orf88Q6PI97 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
C11orf88Q6PI97 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.15■□□□□ 0.18
C11orf88Q6PI97 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
C11orf88Q6PI97 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
C11orf88Q6PI97 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
C11orf88Q6PI97 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
C11orf88Q6PI97 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.14■□□□□ 0.17
C11orf88Q6PI97 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.14■□□□□ 0.17
C11orf88Q6PI97 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.14■□□□□ 0.17
C11orf88Q6PI97 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.14■□□□□ 0.17
C11orf88Q6PI97 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
C11orf88Q6PI97 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.14■□□□□ 0.17
C11orf88Q6PI97 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.14■□□□□ 0.17
C11orf88Q6PI97 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
C11orf88Q6PI97 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
C11orf88Q6PI97 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
C11orf88Q6PI97 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
C11orf88Q6PI97 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.14■□□□□ 0.17
C11orf88Q6PI97 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.14■□□□□ 0.17
C11orf88Q6PI97 AC098590.1-201ENST00000468126 897 ntBASIC16.14■□□□□ 0.17
C11orf88Q6PI97 UNC93B4-201ENST00000505679 747 ntBASIC16.14■□□□□ 0.17
C11orf88Q6PI97 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.14■□□□□ 0.17
C11orf88Q6PI97 C2orf69P4-201ENST00000565394 541 ntBASIC16.14■□□□□ 0.17
C11orf88Q6PI97 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.14■□□□□ 0.17
C11orf88Q6PI97 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC16.14■□□□□ 0.17
C11orf88Q6PI97 AC073648.6-201ENST00000641589 218 ntBASIC16.14■□□□□ 0.17
C11orf88Q6PI97 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
C11orf88Q6PI97 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
C11orf88Q6PI97 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
C11orf88Q6PI97 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
C11orf88Q6PI97 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.14■□□□□ 0.17
C11orf88Q6PI97 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
C11orf88Q6PI97 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
C11orf88Q6PI97 AC007326.2-201ENST00000624224 7579 ntBASIC16.14■□□□□ 0.17
C11orf88Q6PI97 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.14■□□□□ 0.17
C11orf88Q6PI97 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
C11orf88Q6PI97 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
C11orf88Q6PI97 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
C11orf88Q6PI97 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
C11orf88Q6PI97 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.13■□□□□ 0.17
C11orf88Q6PI97 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
C11orf88Q6PI97 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
C11orf88Q6PI97 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
C11orf88Q6PI97 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
C11orf88Q6PI97 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
C11orf88Q6PI97 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
C11orf88Q6PI97 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.13■□□□□ 0.17
C11orf88Q6PI97 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.13■□□□□ 0.17
C11orf88Q6PI97 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
C11orf88Q6PI97 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.13■□□□□ 0.17
C11orf88Q6PI97 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
C11orf88Q6PI97 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
C11orf88Q6PI97 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
C11orf88Q6PI97 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
C11orf88Q6PI97 MIR718-201ENST00000390190 70 ntBASIC16.13■□□□□ 0.17
C11orf88Q6PI97 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
C11orf88Q6PI97 AL158047.1-201ENST00000445918 881 ntBASIC16.13■□□□□ 0.17
C11orf88Q6PI97 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.13■□□□□ 0.17
C11orf88Q6PI97 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.13■□□□□ 0.17
C11orf88Q6PI97 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
C11orf88Q6PI97 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.13■□□□□ 0.17
C11orf88Q6PI97 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
C11orf88Q6PI97 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms