Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RFWD3Q6PCD5 AC104581.1-202ENST00000635932 2618 ntBASIC19.33■□□□□ 0.68
RFWD3Q6PCD5 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.33■□□□□ 0.68
RFWD3Q6PCD5 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
RFWD3Q6PCD5 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RFWD3Q6PCD5 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFWD3Q6PCD5 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFWD3Q6PCD5 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFWD3Q6PCD5 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.32■□□□□ 0.68
RFWD3Q6PCD5 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.32■□□□□ 0.68
RFWD3Q6PCD5 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
RFWD3Q6PCD5 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFWD3Q6PCD5 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RFWD3Q6PCD5 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFWD3Q6PCD5 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.32■□□□□ 0.68
RFWD3Q6PCD5 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.32■□□□□ 0.68
RFWD3Q6PCD5 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.32■□□□□ 0.68
RFWD3Q6PCD5 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RFWD3Q6PCD5 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.32■□□□□ 0.68
RFWD3Q6PCD5 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.32■□□□□ 0.68
RFWD3Q6PCD5 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RFWD3Q6PCD5 AC024243.1-201ENST00000609234 778 ntBASIC19.32■□□□□ 0.68
RFWD3Q6PCD5 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.32■□□□□ 0.68
RFWD3Q6PCD5 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
RFWD3Q6PCD5 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RFWD3Q6PCD5 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RFWD3Q6PCD5 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.32■□□□□ 0.68
RFWD3Q6PCD5 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFWD3Q6PCD5 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.32■□□□□ 0.68
RFWD3Q6PCD5 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RFWD3Q6PCD5 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.32■□□□□ 0.68
RFWD3Q6PCD5 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.32■□□□□ 0.68
RFWD3Q6PCD5 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.32■□□□□ 0.68
RFWD3Q6PCD5 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFWD3Q6PCD5 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFWD3Q6PCD5 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFWD3Q6PCD5 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFWD3Q6PCD5 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFWD3Q6PCD5 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
RFWD3Q6PCD5 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RFWD3Q6PCD5 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFWD3Q6PCD5 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.31■□□□□ 0.68
RFWD3Q6PCD5 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.31■□□□□ 0.68
RFWD3Q6PCD5 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFWD3Q6PCD5 AP000523.1-201ENST00000398242 1049 ntBASIC19.31■□□□□ 0.68
RFWD3Q6PCD5 FAM8A6P-201ENST00000407496 1135 ntBASIC19.31■□□□□ 0.68
RFWD3Q6PCD5 KRT18P38-201ENST00000449496 1282 ntBASIC19.31■□□□□ 0.68
RFWD3Q6PCD5 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFWD3Q6PCD5 AC087388.1-201ENST00000571370 1112 ntBASIC19.31■□□□□ 0.68
RFWD3Q6PCD5 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.31■□□□□ 0.68
RFWD3Q6PCD5 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.31■□□□□ 0.68
RFWD3Q6PCD5 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.31■□□□□ 0.68
RFWD3Q6PCD5 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
RFWD3Q6PCD5 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RFWD3Q6PCD5 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RFWD3Q6PCD5 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFWD3Q6PCD5 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFWD3Q6PCD5 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFWD3Q6PCD5 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.31■□□□□ 0.68
RFWD3Q6PCD5 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
RFWD3Q6PCD5 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFWD3Q6PCD5 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.31■□□□□ 0.68
RFWD3Q6PCD5 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RFWD3Q6PCD5 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RFWD3Q6PCD5 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFWD3Q6PCD5 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFWD3Q6PCD5 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
RFWD3Q6PCD5 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RFWD3Q6PCD5 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFWD3Q6PCD5 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RFWD3Q6PCD5 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFWD3Q6PCD5 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.3■□□□□ 0.68
RFWD3Q6PCD5 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFWD3Q6PCD5 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.3■□□□□ 0.68
RFWD3Q6PCD5 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RFWD3Q6PCD5 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.3■□□□□ 0.68
RFWD3Q6PCD5 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.3■□□□□ 0.68
RFWD3Q6PCD5 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.3■□□□□ 0.68
RFWD3Q6PCD5 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.3■□□□□ 0.68
RFWD3Q6PCD5 AC068587.9-201ENST00000641814 219 ntBASIC19.3■□□□□ 0.68
RFWD3Q6PCD5 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFWD3Q6PCD5 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.3■□□□□ 0.68
RFWD3Q6PCD5 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.3■□□□□ 0.68
RFWD3Q6PCD5 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFWD3Q6PCD5 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RFWD3Q6PCD5 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RFWD3Q6PCD5 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFWD3Q6PCD5 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RFWD3Q6PCD5 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFWD3Q6PCD5 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
RFWD3Q6PCD5 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.3■□□□□ 0.68
RFWD3Q6PCD5 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.3■□□□□ 0.68
RFWD3Q6PCD5 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFWD3Q6PCD5 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RFWD3Q6PCD5 FZD10-202ENST00000539839 3282 ntBASIC19.29■□□□□ 0.68
RFWD3Q6PCD5 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RFWD3Q6PCD5 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.29■□□□□ 0.68
RFWD3Q6PCD5 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFWD3Q6PCD5 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.29■□□□□ 0.68
RFWD3Q6PCD5 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms