Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CASC4Q6P4E1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CASC4Q6P4E1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CASC4Q6P4E1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.95■□□□□ 0.62
CASC4Q6P4E1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.95■□□□□ 0.62
CASC4Q6P4E1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CASC4Q6P4E1 AL354751.1-201ENST00000412768 1863 ntBASIC18.94■□□□□ 0.62
CASC4Q6P4E1 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CASC4Q6P4E1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CASC4Q6P4E1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.94■□□□□ 0.62
CASC4Q6P4E1 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CASC4Q6P4E1 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CASC4Q6P4E1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CASC4Q6P4E1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CASC4Q6P4E1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CASC4Q6P4E1 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.94■□□□□ 0.62
CASC4Q6P4E1 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.94■□□□□ 0.62
CASC4Q6P4E1 TSPY20P-201ENST00000450910 630 ntBASIC18.94■□□□□ 0.62
CASC4Q6P4E1 AC008040.2-201ENST00000461049 708 ntBASIC18.94■□□□□ 0.62
CASC4Q6P4E1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.94■□□□□ 0.62
CASC4Q6P4E1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.94■□□□□ 0.62
CASC4Q6P4E1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.94■□□□□ 0.62
CASC4Q6P4E1 CKBP1-201ENST00000565489 1086 ntBASIC18.94■□□□□ 0.62
CASC4Q6P4E1 MIR6786-201ENST00000616843 113 ntBASIC18.94■□□□□ 0.62
CASC4Q6P4E1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.94■□□□□ 0.62
CASC4Q6P4E1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CASC4Q6P4E1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CASC4Q6P4E1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CASC4Q6P4E1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
CASC4Q6P4E1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CASC4Q6P4E1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CASC4Q6P4E1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CASC4Q6P4E1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CASC4Q6P4E1 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CASC4Q6P4E1 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
CASC4Q6P4E1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.94■□□□□ 0.62
CASC4Q6P4E1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.94■□□□□ 0.62
CASC4Q6P4E1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 AL357033.4-201ENST00000617703 1807 ntBASIC18.93■□□□□ 0.62
CASC4Q6P4E1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 AC011506.1-201ENST00000474329 610 ntBASIC18.93■□□□□ 0.62
CASC4Q6P4E1 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 AC130371.2-201ENST00000619443 611 ntBASIC18.93■□□□□ 0.62
CASC4Q6P4E1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 RCC2P3-201ENST00000418112 1537 ntBASIC18.93■□□□□ 0.62
CASC4Q6P4E1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.93■□□□□ 0.62
CASC4Q6P4E1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.92■□□□□ 0.62
CASC4Q6P4E1 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CASC4Q6P4E1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CASC4Q6P4E1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.92■□□□□ 0.62
CASC4Q6P4E1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CASC4Q6P4E1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CASC4Q6P4E1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CASC4Q6P4E1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CASC4Q6P4E1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CASC4Q6P4E1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CASC4Q6P4E1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CASC4Q6P4E1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
CASC4Q6P4E1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.92■□□□□ 0.62
CASC4Q6P4E1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CASC4Q6P4E1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.92■□□□□ 0.62
CASC4Q6P4E1 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CASC4Q6P4E1 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
CASC4Q6P4E1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CASC4Q6P4E1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CASC4Q6P4E1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CASC4Q6P4E1 FAM197Y1-201ENST00000421178 764 ntBASIC18.92■□□□□ 0.62
CASC4Q6P4E1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms