Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MRPL54Q6P161 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MRPL54Q6P161 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
MRPL54Q6P161 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
MRPL54Q6P161 AL356441.2-201ENST00000443009 864 ntBASIC14.03□□□□□ -0.16
MRPL54Q6P161 AP001330.3-201ENST00000520123 633 ntBASIC14.03□□□□□ -0.16
MRPL54Q6P161 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MRPL54Q6P161 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
MRPL54Q6P161 AL591742.1-201ENST00000604433 565 ntBASIC14.03□□□□□ -0.16
MRPL54Q6P161 AC105020.6-201ENST00000621523 1217 ntBASIC14.03□□□□□ -0.16
MRPL54Q6P161 AL035685.1-201ENST00000636663 812 ntBASIC14.03□□□□□ -0.16
MRPL54Q6P161 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC14.03□□□□□ -0.16
MRPL54Q6P161 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MRPL54Q6P161 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
MRPL54Q6P161 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
MRPL54Q6P161 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
MRPL54Q6P161 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
MRPL54Q6P161 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MRPL54Q6P161 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.03□□□□□ -0.16
MRPL54Q6P161 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
MRPL54Q6P161 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
MRPL54Q6P161 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
MRPL54Q6P161 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
MRPL54Q6P161 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
MRPL54Q6P161 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
MRPL54Q6P161 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MRPL54Q6P161 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
MRPL54Q6P161 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MRPL54Q6P161 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.02□□□□□ -0.16
MRPL54Q6P161 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.02□□□□□ -0.16
MRPL54Q6P161 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MRPL54Q6P161 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.02□□□□□ -0.16
MRPL54Q6P161 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
MRPL54Q6P161 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.02□□□□□ -0.16
MRPL54Q6P161 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
MRPL54Q6P161 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MRPL54Q6P161 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
MRPL54Q6P161 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.02□□□□□ -0.16
MRPL54Q6P161 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.02□□□□□ -0.16
MRPL54Q6P161 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MRPL54Q6P161 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
MRPL54Q6P161 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
MRPL54Q6P161 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.02□□□□□ -0.16
MRPL54Q6P161 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC14.02□□□□□ -0.16
MRPL54Q6P161 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
MRPL54Q6P161 RASA4CP-201ENST00000424092 1398 ntBASIC14.02□□□□□ -0.17
MRPL54Q6P161 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
MRPL54Q6P161 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MRPL54Q6P161 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MRPL54Q6P161 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC14.02□□□□□ -0.17
MRPL54Q6P161 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
MRPL54Q6P161 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC14.02□□□□□ -0.17
MRPL54Q6P161 TESC-206ENST00000541210 936 ntTSL 3 BASIC14.02□□□□□ -0.17
MRPL54Q6P161 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MRPL54Q6P161 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
MRPL54Q6P161 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MRPL54Q6P161 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MRPL54Q6P161 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
MRPL54Q6P161 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.02□□□□□ -0.17
MRPL54Q6P161 AC022211.2-201ENST00000585075 2527 ntBASIC14.02□□□□□ -0.17
MRPL54Q6P161 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
MRPL54Q6P161 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
MRPL54Q6P161 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
MRPL54Q6P161 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.02□□□□□ -0.17
MRPL54Q6P161 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.02□□□□□ -0.17
MRPL54Q6P161 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
MRPL54Q6P161 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
MRPL54Q6P161 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL54Q6P161 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.01□□□□□ -0.17
MRPL54Q6P161 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
MRPL54Q6P161 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.01□□□□□ -0.17
MRPL54Q6P161 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
MRPL54Q6P161 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.01□□□□□ -0.17
MRPL54Q6P161 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.01□□□□□ -0.17
MRPL54Q6P161 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL54Q6P161 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL54Q6P161 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL54Q6P161 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL54Q6P161 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
MRPL54Q6P161 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL54Q6P161 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC14.01□□□□□ -0.17
MRPL54Q6P161 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
MRPL54Q6P161 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL54Q6P161 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
MRPL54Q6P161 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
MRPL54Q6P161 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL54Q6P161 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL54Q6P161 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC14.01□□□□□ -0.17
MRPL54Q6P161 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC14.01□□□□□ -0.17
MRPL54Q6P161 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL54Q6P161 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
MRPL54Q6P161 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
MRPL54Q6P161 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL54Q6P161 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL54Q6P161 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL54Q6P161 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL54Q6P161 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL54Q6P161 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MRPL54Q6P161 AC046158.3-201ENST00000624947 2558 ntBASIC14.01□□□□□ -0.17
MRPL54Q6P161 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms