Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
H3F3CQ6NXT2 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.13■□□□□ 0.33
H3F3CQ6NXT2 AC005332.7-201ENST00000614046 2005 ntBASIC17.13■□□□□ 0.33
H3F3CQ6NXT2 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
H3F3CQ6NXT2 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H3F3CQ6NXT2 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
H3F3CQ6NXT2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H3F3CQ6NXT2 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.13■□□□□ 0.33
H3F3CQ6NXT2 ATP5G2P1-201ENST00000433580 426 ntBASIC17.13■□□□□ 0.33
H3F3CQ6NXT2 PVRIG2P-201ENST00000435460 978 ntBASIC17.13■□□□□ 0.33
H3F3CQ6NXT2 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.13■□□□□ 0.33
H3F3CQ6NXT2 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.13■□□□□ 0.33
H3F3CQ6NXT2 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.13■□□□□ 0.33
H3F3CQ6NXT2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
H3F3CQ6NXT2 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
H3F3CQ6NXT2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H3F3CQ6NXT2 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
H3F3CQ6NXT2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H3F3CQ6NXT2 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.13■□□□□ 0.33
H3F3CQ6NXT2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H3F3CQ6NXT2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.13■□□□□ 0.33
H3F3CQ6NXT2 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.13■□□□□ 0.33
H3F3CQ6NXT2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
H3F3CQ6NXT2 Z98044.1-201ENST00000632503 1764 ntBASIC17.12■□□□□ 0.33
H3F3CQ6NXT2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H3F3CQ6NXT2 AL357033.4-201ENST00000617703 1807 ntBASIC17.12■□□□□ 0.33
H3F3CQ6NXT2 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H3F3CQ6NXT2 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
H3F3CQ6NXT2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.12■□□□□ 0.33
H3F3CQ6NXT2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
H3F3CQ6NXT2 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
H3F3CQ6NXT2 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.12■□□□□ 0.33
H3F3CQ6NXT2 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
H3F3CQ6NXT2 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H3F3CQ6NXT2 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
H3F3CQ6NXT2 AL162741.1-201ENST00000565563 1558 ntBASIC17.12■□□□□ 0.33
H3F3CQ6NXT2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
H3F3CQ6NXT2 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.12■□□□□ 0.33
H3F3CQ6NXT2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.12■□□□□ 0.33
H3F3CQ6NXT2 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.12■□□□□ 0.33
H3F3CQ6NXT2 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.12■□□□□ 0.33
H3F3CQ6NXT2 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.12■□□□□ 0.33
H3F3CQ6NXT2 AC011498.5-201ENST00000592027 486 ntBASIC17.12■□□□□ 0.33
H3F3CQ6NXT2 AC093458.2-201ENST00000623150 629 ntBASIC17.12■□□□□ 0.33
H3F3CQ6NXT2 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.12■□□□□ 0.33
H3F3CQ6NXT2 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H3F3CQ6NXT2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
H3F3CQ6NXT2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H3F3CQ6NXT2 AL161938.1-201ENST00000569833 2180 ntBASIC17.12■□□□□ 0.33
H3F3CQ6NXT2 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
H3F3CQ6NXT2 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H3F3CQ6NXT2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H3F3CQ6NXT2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
H3F3CQ6NXT2 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H3F3CQ6NXT2 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H3F3CQ6NXT2 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.11■□□□□ 0.33
H3F3CQ6NXT2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
H3F3CQ6NXT2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
H3F3CQ6NXT2 MTMR9LP-203ENST00000426597 1545 ntBASIC17.11■□□□□ 0.33
H3F3CQ6NXT2 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
H3F3CQ6NXT2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
H3F3CQ6NXT2 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
H3F3CQ6NXT2 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
H3F3CQ6NXT2 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H3F3CQ6NXT2 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
H3F3CQ6NXT2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
H3F3CQ6NXT2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
H3F3CQ6NXT2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
H3F3CQ6NXT2 BX323043.1-201ENST00000641006 1765 ntBASIC17.11■□□□□ 0.33
H3F3CQ6NXT2 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
H3F3CQ6NXT2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
H3F3CQ6NXT2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
H3F3CQ6NXT2 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
H3F3CQ6NXT2 KRT18P56-201ENST00000507275 550 ntBASIC17.11■□□□□ 0.33
H3F3CQ6NXT2 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.11■□□□□ 0.33
H3F3CQ6NXT2 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
H3F3CQ6NXT2 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
H3F3CQ6NXT2 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
H3F3CQ6NXT2 NPAP1P7-201ENST00000613027 823 ntBASIC17.11■□□□□ 0.33
H3F3CQ6NXT2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H3F3CQ6NXT2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
H3F3CQ6NXT2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
H3F3CQ6NXT2 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
H3F3CQ6NXT2 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
H3F3CQ6NXT2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H3F3CQ6NXT2 AC093525.10-201ENST00000625130 1569 ntBASIC17.11■□□□□ 0.33
H3F3CQ6NXT2 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
H3F3CQ6NXT2 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.1■□□□□ 0.33
H3F3CQ6NXT2 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.1■□□□□ 0.33
H3F3CQ6NXT2 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
H3F3CQ6NXT2 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
H3F3CQ6NXT2 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.1■□□□□ 0.33
H3F3CQ6NXT2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
H3F3CQ6NXT2 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
H3F3CQ6NXT2 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
H3F3CQ6NXT2 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.1■□□□□ 0.33
H3F3CQ6NXT2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
H3F3CQ6NXT2 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
H3F3CQ6NXT2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
H3F3CQ6NXT2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms