Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SWSAP1Q6NVH7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SWSAP1Q6NVH7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SWSAP1Q6NVH7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SWSAP1Q6NVH7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
SWSAP1Q6NVH7 RNF126P1-202ENST00000569893 925 ntBASIC20.63■□□□□ 0.89
SWSAP1Q6NVH7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.63■□□□□ 0.89
SWSAP1Q6NVH7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.63■□□□□ 0.89
SWSAP1Q6NVH7 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.63■□□□□ 0.89
SWSAP1Q6NVH7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SWSAP1Q6NVH7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.63■□□□□ 0.89
SWSAP1Q6NVH7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.63■□□□□ 0.89
SWSAP1Q6NVH7 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.63■□□□□ 0.89
SWSAP1Q6NVH7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.63■□□□□ 0.89
SWSAP1Q6NVH7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SWSAP1Q6NVH7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.63■□□□□ 0.89
SWSAP1Q6NVH7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SWSAP1Q6NVH7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.63■□□□□ 0.89
SWSAP1Q6NVH7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SWSAP1Q6NVH7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SWSAP1Q6NVH7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.63■□□□□ 0.89
SWSAP1Q6NVH7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SWSAP1Q6NVH7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SWSAP1Q6NVH7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SWSAP1Q6NVH7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SWSAP1Q6NVH7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.62■□□□□ 0.89
SWSAP1Q6NVH7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SWSAP1Q6NVH7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
SWSAP1Q6NVH7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SWSAP1Q6NVH7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.62■□□□□ 0.89
SWSAP1Q6NVH7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.62■□□□□ 0.89
SWSAP1Q6NVH7 AC009065.1-201ENST00000564055 1225 ntBASIC20.62■□□□□ 0.89
SWSAP1Q6NVH7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.62■□□□□ 0.89
SWSAP1Q6NVH7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.62■□□□□ 0.89
SWSAP1Q6NVH7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.62■□□□□ 0.89
SWSAP1Q6NVH7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SWSAP1Q6NVH7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SWSAP1Q6NVH7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SWSAP1Q6NVH7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SWSAP1Q6NVH7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SWSAP1Q6NVH7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SWSAP1Q6NVH7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SWSAP1Q6NVH7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SWSAP1Q6NVH7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SWSAP1Q6NVH7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SWSAP1Q6NVH7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SWSAP1Q6NVH7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.61■□□□□ 0.89
SWSAP1Q6NVH7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SWSAP1Q6NVH7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.61■□□□□ 0.89
SWSAP1Q6NVH7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.61■□□□□ 0.89
SWSAP1Q6NVH7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.61■□□□□ 0.89
SWSAP1Q6NVH7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SWSAP1Q6NVH7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SWSAP1Q6NVH7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SWSAP1Q6NVH7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SWSAP1Q6NVH7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SWSAP1Q6NVH7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SWSAP1Q6NVH7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SWSAP1Q6NVH7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SWSAP1Q6NVH7 AC016734.2-201ENST00000624325 1377 ntBASIC20.6■□□□□ 0.89
SWSAP1Q6NVH7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SWSAP1Q6NVH7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.6■□□□□ 0.89
SWSAP1Q6NVH7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.6■□□□□ 0.89
SWSAP1Q6NVH7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SWSAP1Q6NVH7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SWSAP1Q6NVH7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SWSAP1Q6NVH7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SWSAP1Q6NVH7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
SWSAP1Q6NVH7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SWSAP1Q6NVH7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.6■□□□□ 0.89
SWSAP1Q6NVH7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.6■□□□□ 0.89
SWSAP1Q6NVH7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SWSAP1Q6NVH7 BX276092.5-203ENST00000456199 560 ntBASIC20.6■□□□□ 0.89
SWSAP1Q6NVH7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SWSAP1Q6NVH7 KRT18P56-201ENST00000507275 550 ntBASIC20.6■□□□□ 0.89
SWSAP1Q6NVH7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.6■□□□□ 0.89
SWSAP1Q6NVH7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.6■□□□□ 0.89
SWSAP1Q6NVH7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.6■□□□□ 0.89
SWSAP1Q6NVH7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SWSAP1Q6NVH7 AC112777.1-201ENST00000540175 1423 ntBASIC20.6■□□□□ 0.89
SWSAP1Q6NVH7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.6■□□□□ 0.89
SWSAP1Q6NVH7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SWSAP1Q6NVH7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.59■□□□□ 0.89
SWSAP1Q6NVH7 MYLKP1-201ENST00000509077 1580 ntBASIC20.59■□□□□ 0.89
SWSAP1Q6NVH7 AC093525.10-201ENST00000625130 1569 ntBASIC20.59■□□□□ 0.89
SWSAP1Q6NVH7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SWSAP1Q6NVH7 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SWSAP1Q6NVH7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.59■□□□□ 0.89
SWSAP1Q6NVH7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SWSAP1Q6NVH7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.59■□□□□ 0.89
SWSAP1Q6NVH7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.59■□□□□ 0.89
SWSAP1Q6NVH7 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SWSAP1Q6NVH7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SWSAP1Q6NVH7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SWSAP1Q6NVH7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SWSAP1Q6NVH7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.59■□□□□ 0.89
SWSAP1Q6NVH7 TSPY22P-201ENST00000427496 604 ntBASIC20.59■□□□□ 0.89
SWSAP1Q6NVH7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SWSAP1Q6NVH7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.59■□□□□ 0.89
SWSAP1Q6NVH7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms