Protein–RNA interactions for Protein: Q6NT52

CGB2, Choriogonadotropin subunit beta variant 2, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB2Q6NT52 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.18■□□□□ 0.5
CGB2Q6NT52 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CGB2Q6NT52 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CGB2Q6NT52 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CGB2Q6NT52 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.18■□□□□ 0.5
CGB2Q6NT52 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CGB2Q6NT52 AL121832.2-201ENST00000610979 668 ntBASIC18.18■□□□□ 0.5
CGB2Q6NT52 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.18■□□□□ 0.5
CGB2Q6NT52 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.18■□□□□ 0.5
CGB2Q6NT52 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CGB2Q6NT52 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CGB2Q6NT52 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CGB2Q6NT52 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CGB2Q6NT52 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CGB2Q6NT52 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CGB2Q6NT52 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CGB2Q6NT52 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CGB2Q6NT52 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
CGB2Q6NT52 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CGB2Q6NT52 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CGB2Q6NT52 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CGB2Q6NT52 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CGB2Q6NT52 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CGB2Q6NT52 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
CGB2Q6NT52 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.17■□□□□ 0.5
CGB2Q6NT52 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CGB2Q6NT52 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CGB2Q6NT52 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.17■□□□□ 0.5
CGB2Q6NT52 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CGB2Q6NT52 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
CGB2Q6NT52 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.17■□□□□ 0.5
CGB2Q6NT52 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.17■□□□□ 0.5
CGB2Q6NT52 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CGB2Q6NT52 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.17■□□□□ 0.5
CGB2Q6NT52 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.17■□□□□ 0.5
CGB2Q6NT52 AL121829.2-201ENST00000620908 328 ntBASIC18.17■□□□□ 0.5
CGB2Q6NT52 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CGB2Q6NT52 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CGB2Q6NT52 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CGB2Q6NT52 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CGB2Q6NT52 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
CGB2Q6NT52 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CGB2Q6NT52 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CGB2Q6NT52 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CGB2Q6NT52 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CGB2Q6NT52 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.16■□□□□ 0.5
CGB2Q6NT52 KRT8P3-201ENST00000519669 1449 ntBASIC18.16■□□□□ 0.5
CGB2Q6NT52 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CGB2Q6NT52 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CGB2Q6NT52 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CGB2Q6NT52 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.16■□□□□ 0.5
CGB2Q6NT52 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CGB2Q6NT52 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CGB2Q6NT52 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CGB2Q6NT52 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.16■□□□□ 0.5
CGB2Q6NT52 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CGB2Q6NT52 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CGB2Q6NT52 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.16■□□□□ 0.5
CGB2Q6NT52 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CGB2Q6NT52 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.16■□□□□ 0.5
CGB2Q6NT52 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.16■□□□□ 0.5
CGB2Q6NT52 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.16■□□□□ 0.5
CGB2Q6NT52 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CGB2Q6NT52 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CGB2Q6NT52 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CGB2Q6NT52 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CGB2Q6NT52 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CGB2Q6NT52 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CGB2Q6NT52 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
CGB2Q6NT52 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CGB2Q6NT52 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CGB2Q6NT52 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CGB2Q6NT52 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CGB2Q6NT52 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.15■□□□□ 0.5
CGB2Q6NT52 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CGB2Q6NT52 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CGB2Q6NT52 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CGB2Q6NT52 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.15■□□□□ 0.5
CGB2Q6NT52 DUSP5P2-201ENST00000426873 1033 ntBASIC18.15■□□□□ 0.5
CGB2Q6NT52 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.15■□□□□ 0.5
CGB2Q6NT52 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.15■□□□□ 0.5
CGB2Q6NT52 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.15■□□□□ 0.5
CGB2Q6NT52 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CGB2Q6NT52 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CGB2Q6NT52 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.15■□□□□ 0.5
CGB2Q6NT52 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.15■□□□□ 0.5
CGB2Q6NT52 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CGB2Q6NT52 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CGB2Q6NT52 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CGB2Q6NT52 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CGB2Q6NT52 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CGB2Q6NT52 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.15■□□□□ 0.5
CGB2Q6NT52 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CGB2Q6NT52 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CGB2Q6NT52 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CGB2Q6NT52 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.15■□□□□ 0.5
CGB2Q6NT52 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CGB2Q6NT52 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.14■□□□□ 0.5
CGB2Q6NT52 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CGB2Q6NT52 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms