Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HLA-DQA1Q5Y7H0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQA1Q5Y7H0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.31■□□□□ 0.36
HLA-DQA1Q5Y7H0 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HLA-DQA1Q5Y7H0 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQA1Q5Y7H0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HLA-DQA1Q5Y7H0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.31■□□□□ 0.36
HLA-DQA1Q5Y7H0 AL357033.4-201ENST00000617703 1807 ntBASIC17.31■□□□□ 0.36
HLA-DQA1Q5Y7H0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
HLA-DQA1Q5Y7H0 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQA1Q5Y7H0 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
HLA-DQA1Q5Y7H0 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQA1Q5Y7H0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.3■□□□□ 0.36
HLA-DQA1Q5Y7H0 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQA1Q5Y7H0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQA1Q5Y7H0 AC034236.2-201ENST00000606662 1610 ntBASIC17.3■□□□□ 0.36
HLA-DQA1Q5Y7H0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQA1Q5Y7H0 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQA1Q5Y7H0 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQA1Q5Y7H0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.3■□□□□ 0.36
HLA-DQA1Q5Y7H0 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.3■□□□□ 0.36
HLA-DQA1Q5Y7H0 KRT18P57-201ENST00000443599 1254 ntBASIC17.3■□□□□ 0.36
HLA-DQA1Q5Y7H0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.3■□□□□ 0.36
HLA-DQA1Q5Y7H0 MYC-208ENST00000641036 567 ntBASIC17.3■□□□□ 0.36
HLA-DQA1Q5Y7H0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQA1Q5Y7H0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQA1Q5Y7H0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQA1Q5Y7H0 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
HLA-DQA1Q5Y7H0 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQA1Q5Y7H0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DQA1Q5Y7H0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 BX664615.1-201ENST00000443558 458 ntBASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 NEK4P2-201ENST00000580004 1012 ntBASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 AL031432.5-201ENST00000641059 760 ntBASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 AC092865.7-201ENST00000641832 219 ntBASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 MTMR9LP-203ENST00000426597 1545 ntBASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DQA1Q5Y7H0 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQA1Q5Y7H0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DQA1Q5Y7H0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DQA1Q5Y7H0 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQA1Q5Y7H0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQA1Q5Y7H0 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQA1Q5Y7H0 Z98044.1-201ENST00000632503 1764 ntBASIC17.28■□□□□ 0.36
HLA-DQA1Q5Y7H0 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQA1Q5Y7H0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
HLA-DQA1Q5Y7H0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQA1Q5Y7H0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQA1Q5Y7H0 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DQA1Q5Y7H0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HLA-DQA1Q5Y7H0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DQA1Q5Y7H0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DQA1Q5Y7H0 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DQA1Q5Y7H0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.28■□□□□ 0.36
HLA-DQA1Q5Y7H0 KRT18P23-201ENST00000435622 1283 ntBASIC17.28■□□□□ 0.36
HLA-DQA1Q5Y7H0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.28■□□□□ 0.36
HLA-DQA1Q5Y7H0 COX11P1-201ENST00000489116 835 ntBASIC17.28■□□□□ 0.36
HLA-DQA1Q5Y7H0 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DQA1Q5Y7H0 KRT18P21-201ENST00000515767 1272 ntBASIC17.28■□□□□ 0.36
HLA-DQA1Q5Y7H0 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DQA1Q5Y7H0 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DQA1Q5Y7H0 AC098818.2-201ENST00000564925 2320 ntBASIC17.28■□□□□ 0.36
HLA-DQA1Q5Y7H0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
HLA-DQA1Q5Y7H0 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
HLA-DQA1Q5Y7H0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DQA1Q5Y7H0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DQA1Q5Y7H0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DQA1Q5Y7H0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms