Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.29■□□□□ 0.68
RAB6CQ53S08 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB6CQ53S08 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
RAB6CQ53S08 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB6CQ53S08 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.28■□□□□ 0.68
RAB6CQ53S08 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB6CQ53S08 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB6CQ53S08 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB6CQ53S08 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.28■□□□□ 0.68
RAB6CQ53S08 HOXB1-202ENST00000577092 1414 ntBASIC19.28■□□□□ 0.68
RAB6CQ53S08 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB6CQ53S08 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.28■□□□□ 0.68
RAB6CQ53S08 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.28■□□□□ 0.68
RAB6CQ53S08 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RAB6CQ53S08 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.28■□□□□ 0.68
RAB6CQ53S08 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.28■□□□□ 0.68
RAB6CQ53S08 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.28■□□□□ 0.68
RAB6CQ53S08 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RAB6CQ53S08 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB6CQ53S08 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB6CQ53S08 AC112497.1-201ENST00000624824 639 ntBASIC19.28■□□□□ 0.68
RAB6CQ53S08 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB6CQ53S08 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB6CQ53S08 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB6CQ53S08 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB6CQ53S08 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.28■□□□□ 0.68
RAB6CQ53S08 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.28■□□□□ 0.68
RAB6CQ53S08 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.28■□□□□ 0.68
RAB6CQ53S08 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RAB6CQ53S08 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB6CQ53S08 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
RAB6CQ53S08 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RAB6CQ53S08 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB6CQ53S08 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
RAB6CQ53S08 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RAB6CQ53S08 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.27■□□□□ 0.68
RAB6CQ53S08 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.27■□□□□ 0.68
RAB6CQ53S08 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RAB6CQ53S08 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.27■□□□□ 0.68
RAB6CQ53S08 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.27■□□□□ 0.68
RAB6CQ53S08 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
RAB6CQ53S08 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
RAB6CQ53S08 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.27■□□□□ 0.68
RAB6CQ53S08 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.27■□□□□ 0.68
RAB6CQ53S08 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB6CQ53S08 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB6CQ53S08 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB6CQ53S08 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.27■□□□□ 0.68
RAB6CQ53S08 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.27■□□□□ 0.68
RAB6CQ53S08 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RAB6CQ53S08 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.27■□□□□ 0.68
RAB6CQ53S08 AC005363.2-201ENST00000618631 242 ntBASIC19.27■□□□□ 0.68
RAB6CQ53S08 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.27■□□□□ 0.68
RAB6CQ53S08 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAB6CQ53S08 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
RAB6CQ53S08 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.27■□□□□ 0.67
RAB6CQ53S08 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.27■□□□□ 0.67
RAB6CQ53S08 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RAB6CQ53S08 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RAB6CQ53S08 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.27■□□□□ 0.67
RAB6CQ53S08 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
RAB6CQ53S08 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
RAB6CQ53S08 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
RAB6CQ53S08 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.27■□□□□ 0.67
RAB6CQ53S08 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB6CQ53S08 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAB6CQ53S08 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.26■□□□□ 0.67
RAB6CQ53S08 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAB6CQ53S08 BICD1-207ENST00000551848 1962 ntBASIC19.26■□□□□ 0.67
RAB6CQ53S08 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
RAB6CQ53S08 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.26■□□□□ 0.67
RAB6CQ53S08 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB6CQ53S08 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB6CQ53S08 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB6CQ53S08 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.26■□□□□ 0.67
RAB6CQ53S08 AC135776.1-201ENST00000319817 2481 ntBASIC19.26■□□□□ 0.67
RAB6CQ53S08 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.26■□□□□ 0.67
RAB6CQ53S08 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB6CQ53S08 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAB6CQ53S08 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAB6CQ53S08 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
RAB6CQ53S08 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
RAB6CQ53S08 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.26■□□□□ 0.67
RAB6CQ53S08 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.26■□□□□ 0.67
RAB6CQ53S08 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAB6CQ53S08 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.26■□□□□ 0.67
RAB6CQ53S08 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
RAB6CQ53S08 LINC01023-201ENST00000606054 436 ntBASIC19.26■□□□□ 0.67
RAB6CQ53S08 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAB6CQ53S08 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.26■□□□□ 0.67
RAB6CQ53S08 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.26■□□□□ 0.67
RAB6CQ53S08 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.26■□□□□ 0.67
RAB6CQ53S08 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
RAB6CQ53S08 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.26■□□□□ 0.67
RAB6CQ53S08 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB6CQ53S08 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RAB6CQ53S08 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB6CQ53S08 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
RAB6CQ53S08 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAB6CQ53S08 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms