Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN20Q4JDL3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN20Q4JDL3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
PTPN20Q4JDL3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PTPN20Q4JDL3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN20Q4JDL3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN20Q4JDL3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PTPN20Q4JDL3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN20Q4JDL3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
PTPN20Q4JDL3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN20Q4JDL3 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN20Q4JDL3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN20Q4JDL3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PTPN20Q4JDL3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.51■□□□□ 0.71
PTPN20Q4JDL3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN20Q4JDL3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.51■□□□□ 0.71
PTPN20Q4JDL3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN20Q4JDL3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN20Q4JDL3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 AC113347.1-201ENST00000413321 391 ntBASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 SEC1P-202ENST00000473944 940 ntBASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 AL163051.1-201ENST00000569214 1512 ntBASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 BICD1-207ENST00000551848 1962 ntBASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPN20Q4JDL3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 AC104390.1-201ENST00000555663 520 ntBASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 NEK4P2-201ENST00000580004 1012 ntBASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 AC005363.2-201ENST00000618631 242 ntBASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 AC141257.4-201ENST00000634557 245 ntBASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 AC136944.6-201ENST00000634818 245 ntBASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.49■□□□□ 0.71
PTPN20Q4JDL3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PTPN20Q4JDL3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTPN20Q4JDL3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPN20Q4JDL3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms