Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ERCC6LQ2NKX8 PCDH8P1-201ENST00000428983 2773 ntBASIC19.65■□□□□ 0.74
ERCC6LQ2NKX8 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
ERCC6LQ2NKX8 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
ERCC6LQ2NKX8 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
ERCC6LQ2NKX8 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ERCC6LQ2NKX8 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ERCC6LQ2NKX8 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ERCC6LQ2NKX8 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ERCC6LQ2NKX8 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
ERCC6LQ2NKX8 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ERCC6LQ2NKX8 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC6LQ2NKX8 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC6LQ2NKX8 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC6LQ2NKX8 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC6LQ2NKX8 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC6LQ2NKX8 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
ERCC6LQ2NKX8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC6LQ2NKX8 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC6LQ2NKX8 KRT19P1-201ENST00000405746 1186 ntBASIC19.64■□□□□ 0.73
ERCC6LQ2NKX8 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC6LQ2NKX8 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.64■□□□□ 0.73
ERCC6LQ2NKX8 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.64■□□□□ 0.73
ERCC6LQ2NKX8 AC013268.1-206ENST00000638368 961 ntBASIC19.64■□□□□ 0.73
ERCC6LQ2NKX8 AC112229.1-201ENST00000639295 961 ntBASIC19.64■□□□□ 0.73
ERCC6LQ2NKX8 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
ERCC6LQ2NKX8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC6LQ2NKX8 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
ERCC6LQ2NKX8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC6LQ2NKX8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
ERCC6LQ2NKX8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.64■□□□□ 0.73
ERCC6LQ2NKX8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.64■□□□□ 0.73
ERCC6LQ2NKX8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC6LQ2NKX8 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC6LQ2NKX8 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC6LQ2NKX8 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ERCC6LQ2NKX8 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC6LQ2NKX8 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC6LQ2NKX8 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC6LQ2NKX8 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC6LQ2NKX8 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC6LQ2NKX8 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC6LQ2NKX8 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC6LQ2NKX8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.63■□□□□ 0.73
ERCC6LQ2NKX8 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC6LQ2NKX8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
ERCC6LQ2NKX8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.63■□□□□ 0.73
ERCC6LQ2NKX8 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.63■□□□□ 0.73
ERCC6LQ2NKX8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.63■□□□□ 0.73
ERCC6LQ2NKX8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.63■□□□□ 0.73
ERCC6LQ2NKX8 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.63■□□□□ 0.73
ERCC6LQ2NKX8 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC6LQ2NKX8 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC6LQ2NKX8 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC6LQ2NKX8 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC6LQ2NKX8 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC6LQ2NKX8 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC6LQ2NKX8 LINC00602-201ENST00000629776 2065 ntBASIC19.63■□□□□ 0.73
ERCC6LQ2NKX8 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC6LQ2NKX8 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC6LQ2NKX8 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ERCC6LQ2NKX8 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 LTF-203ENST00000426532 2494 ntTSL 2 BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 KRT18P61-201ENST00000585825 1298 ntBASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ERCC6LQ2NKX8 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms