Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC32.55■■■□□ 2.8
HMGXB3Q12766 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
HMGXB3Q12766 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC32.55■■■□□ 2.8
HMGXB3Q12766 ETFA-208ENST00000559602 792 ntTSL 3 BASIC32.55■■■□□ 2.8
HMGXB3Q12766 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC32.55■■■□□ 2.8
HMGXB3Q12766 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC32.55■■■□□ 2.8
HMGXB3Q12766 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
HMGXB3Q12766 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
HMGXB3Q12766 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC32.54■■■□□ 2.8
HMGXB3Q12766 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC32.54■■■□□ 2.8
HMGXB3Q12766 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
HMGXB3Q12766 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
HMGXB3Q12766 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
HMGXB3Q12766 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
HMGXB3Q12766 CTNS-203ENST00000399306 803 ntTSL 3 BASIC32.54■■■□□ 2.8
HMGXB3Q12766 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
HMGXB3Q12766 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC32.54■■■□□ 2.8
HMGXB3Q12766 AC008687.5-201ENST00000593746 558 ntBASIC32.54■■■□□ 2.8
HMGXB3Q12766 MTDHP4-201ENST00000600287 670 ntBASIC32.54■■■□□ 2.8
HMGXB3Q12766 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC32.54■■■□□ 2.8
HMGXB3Q12766 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC32.54■■■□□ 2.8
HMGXB3Q12766 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC32.54■■■□□ 2.8
HMGXB3Q12766 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC32.54■■■□□ 2.8
HMGXB3Q12766 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
HMGXB3Q12766 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
HMGXB3Q12766 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
HMGXB3Q12766 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC32.53■■■□□ 2.8
HMGXB3Q12766 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC32.53■■■□□ 2.8
HMGXB3Q12766 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC32.53■■■□□ 2.8
HMGXB3Q12766 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
HMGXB3Q12766 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC32.52■■■□□ 2.8
HMGXB3Q12766 MIR149-201ENST00000384879 89 ntBASIC32.52■■■□□ 2.8
HMGXB3Q12766 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
HMGXB3Q12766 MCCD1P2-201ENST00000423228 335 ntBASIC32.52■■■□□ 2.8
HMGXB3Q12766 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC32.52■■■□□ 2.8
HMGXB3Q12766 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC32.52■■■□□ 2.8
HMGXB3Q12766 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC32.52■■■□□ 2.8
HMGXB3Q12766 MTDHP5-201ENST00000598980 586 ntBASIC32.52■■■□□ 2.8
HMGXB3Q12766 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
HMGXB3Q12766 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC32.52■■■□□ 2.8
HMGXB3Q12766 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC32.52■■■□□ 2.8
HMGXB3Q12766 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
HMGXB3Q12766 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
HMGXB3Q12766 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
HMGXB3Q12766 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC32.51■■■□□ 2.8
HMGXB3Q12766 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC32.51■■■□□ 2.8
HMGXB3Q12766 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC32.51■■■□□ 2.8
HMGXB3Q12766 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
HMGXB3Q12766 LBX2-AS1-202ENST00000603175 2083 ntBASIC32.51■■■□□ 2.8
HMGXB3Q12766 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC32.51■■■□□ 2.79
HMGXB3Q12766 AL163051.1-201ENST00000569214 1512 ntBASIC32.51■■■□□ 2.79
HMGXB3Q12766 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
HMGXB3Q12766 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC32.51■■■□□ 2.79
HMGXB3Q12766 HEIH-201ENST00000623091 1652 ntBASIC32.51■■■□□ 2.79
HMGXB3Q12766 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC32.51■■■□□ 2.79
HMGXB3Q12766 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC32.51■■■□□ 2.79
HMGXB3Q12766 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC32.51■■■□□ 2.79
HMGXB3Q12766 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC32.51■■■□□ 2.79
HMGXB3Q12766 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.79
HMGXB3Q12766 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC32.51■■■□□ 2.79
HMGXB3Q12766 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
HMGXB3Q12766 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC32.51■■■□□ 2.79
HMGXB3Q12766 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
HMGXB3Q12766 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC32.5■■■□□ 2.79
HMGXB3Q12766 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
HMGXB3Q12766 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC32.5■■■□□ 2.79
HMGXB3Q12766 AC064836.3-201ENST00000607928 673 ntBASIC32.5■■■□□ 2.79
HMGXB3Q12766 AC009154.2-201ENST00000621177 724 ntBASIC32.5■■■□□ 2.79
HMGXB3Q12766 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
HMGXB3Q12766 USP39-204ENST00000409766 2033 ntTSL 2 BASIC32.5■■■□□ 2.79
HMGXB3Q12766 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC32.5■■■□□ 2.79
HMGXB3Q12766 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
HMGXB3Q12766 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
HMGXB3Q12766 INIP-202ENST00000374236 874 ntTSL 2 BASIC32.49■■■□□ 2.79
HMGXB3Q12766 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC32.49■■■□□ 2.79
HMGXB3Q12766 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
HMGXB3Q12766 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
HMGXB3Q12766 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
HMGXB3Q12766 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC32.49■■■□□ 2.79
HMGXB3Q12766 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
HMGXB3Q12766 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
HMGXB3Q12766 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
HMGXB3Q12766 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
HMGXB3Q12766 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC32.48■■■□□ 2.79
HMGXB3Q12766 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
HMGXB3Q12766 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
HMGXB3Q12766 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC32.48■■■□□ 2.79
HMGXB3Q12766 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC32.48■■■□□ 2.79
HMGXB3Q12766 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC32.48■■■□□ 2.79
HMGXB3Q12766 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC32.48■■■□□ 2.79
HMGXB3Q12766 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC32.48■■■□□ 2.79
HMGXB3Q12766 KRT18P28-201ENST00000453838 1332 ntBASIC32.48■■■□□ 2.79
HMGXB3Q12766 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC32.48■■■□□ 2.79
HMGXB3Q12766 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC32.48■■■□□ 2.79
HMGXB3Q12766 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
HMGXB3Q12766 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC32.48■■■□□ 2.79
HMGXB3Q12766 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC32.48■■■□□ 2.79
HMGXB3Q12766 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
HMGXB3Q12766 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC32.47■■■□□ 2.79
HMGXB3Q12766 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC32.47■■■□□ 2.79
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms