Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEP78395 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEP78395 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEP78395 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEP78395 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEP78395 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEP78395 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PRAMEP78395 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEP78395 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEP78395 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
PRAMEP78395 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.72■□□□□ 0.59
PRAMEP78395 AC008622.2-201ENST00000617006 1229 ntBASIC18.72■□□□□ 0.59
PRAMEP78395 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.72■□□□□ 0.59
PRAMEP78395 MYC-208ENST00000641036 567 ntBASIC18.72■□□□□ 0.59
PRAMEP78395 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEP78395 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEP78395 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEP78395 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEP78395 AL109659.2-201ENST00000606809 1674 ntBASIC18.72■□□□□ 0.59
PRAMEP78395 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEP78395 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEP78395 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEP78395 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEP78395 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEP78395 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEP78395 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRAMEP78395 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEP78395 AC126763.1-201ENST00000552015 2118 ntBASIC18.71■□□□□ 0.59
PRAMEP78395 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.71■□□□□ 0.59
PRAMEP78395 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEP78395 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.71■□□□□ 0.59
PRAMEP78395 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.71■□□□□ 0.59
PRAMEP78395 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEP78395 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEP78395 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
PRAMEP78395 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEP78395 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.71■□□□□ 0.59
PRAMEP78395 MCCD1P1-208ENST00000445732 328 ntBASIC18.71■□□□□ 0.59
PRAMEP78395 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.71■□□□□ 0.59
PRAMEP78395 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.71■□□□□ 0.59
PRAMEP78395 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PRAMEP78395 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEP78395 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEP78395 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEP78395 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.71■□□□□ 0.59
PRAMEP78395 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEP78395 AC008556.1-201ENST00000610908 2040 ntBASIC18.71■□□□□ 0.59
PRAMEP78395 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.71■□□□□ 0.59
PRAMEP78395 AL499627.1-201ENST00000569373 2188 ntBASIC18.71■□□□□ 0.59
PRAMEP78395 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.7■□□□□ 0.58
PRAMEP78395 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.7■□□□□ 0.58
PRAMEP78395 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.7■□□□□ 0.58
PRAMEP78395 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEP78395 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PRAMEP78395 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEP78395 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEP78395 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEP78395 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEP78395 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEP78395 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEP78395 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEP78395 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.7■□□□□ 0.58
PRAMEP78395 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.7■□□□□ 0.58
PRAMEP78395 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
PRAMEP78395 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.7■□□□□ 0.58
PRAMEP78395 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEP78395 AP000525.1-201ENST00000608286 694 ntBASIC18.7■□□□□ 0.58
PRAMEP78395 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.7■□□□□ 0.58
PRAMEP78395 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEP78395 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEP78395 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.7■□□□□ 0.58
PRAMEP78395 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PRAMEP78395 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.7■□□□□ 0.58
PRAMEP78395 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEP78395 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PRAMEP78395 GPAT2P1-201ENST00000444924 1672 ntBASIC18.69■□□□□ 0.58
PRAMEP78395 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEP78395 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PRAMEP78395 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.69■□□□□ 0.58
PRAMEP78395 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEP78395 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.69■□□□□ 0.58
PRAMEP78395 FZD10-202ENST00000539839 3282 ntBASIC18.69■□□□□ 0.58
PRAMEP78395 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEP78395 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PRAMEP78395 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEP78395 AL023284.2-201ENST00000405850 579 ntBASIC18.69■□□□□ 0.58
PRAMEP78395 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.69■□□□□ 0.58
PRAMEP78395 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.69■□□□□ 0.58
PRAMEP78395 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
PRAMEP78395 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEP78395 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PRAMEP78395 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEP78395 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEP78395 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEP78395 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PRAMEP78395 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEP78395 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEP78395 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PRAMEP78395 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEP78395 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms