Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HIST1H3AP68431 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HIST1H3AP68431 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
HIST1H3AP68431 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HIST1H3AP68431 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.2■□□□□ 0.18
HIST1H3AP68431 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HIST1H3AP68431 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
HIST1H3AP68431 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST1H3AP68431 KRT8P9-201ENST00000558927 1449 ntBASIC16.2■□□□□ 0.18
HIST1H3AP68431 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST1H3AP68431 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST1H3AP68431 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.2■□□□□ 0.18
HIST1H3AP68431 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HIST1H3AP68431 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST1H3AP68431 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST1H3AP68431 AC026471.1-201ENST00000564629 3026 ntBASIC16.2■□□□□ 0.18
HIST1H3AP68431 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.2■□□□□ 0.18
HIST1H3AP68431 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HIST1H3AP68431 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HIST1H3AP68431 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
HIST1H3AP68431 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST1H3AP68431 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST1H3AP68431 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.2■□□□□ 0.18
HIST1H3AP68431 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HIST1H3AP68431 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.2■□□□□ 0.18
HIST1H3AP68431 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.2■□□□□ 0.18
HIST1H3AP68431 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HIST1H3AP68431 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.2■□□□□ 0.18
HIST1H3AP68431 AC010947.1-201ENST00000623454 693 ntBASIC16.2■□□□□ 0.18
HIST1H3AP68431 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST1H3AP68431 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HIST1H3AP68431 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST1H3AP68431 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.2■□□□□ 0.18
HIST1H3AP68431 CYP2D8P-201ENST00000433633 1490 ntBASIC16.2■□□□□ 0.18
HIST1H3AP68431 AL390961.4-201ENST00000623958 2535 ntBASIC16.2■□□□□ 0.18
HIST1H3AP68431 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
HIST1H3AP68431 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.2■□□□□ 0.18
HIST1H3AP68431 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.2■□□□□ 0.18
HIST1H3AP68431 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST1H3AP68431 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST1H3AP68431 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.2■□□□□ 0.18
HIST1H3AP68431 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
HIST1H3AP68431 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.2■□□□□ 0.18
HIST1H3AP68431 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST1H3AP68431 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
HIST1H3AP68431 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST1H3AP68431 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST1H3AP68431 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.19■□□□□ 0.18
HIST1H3AP68431 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.19■□□□□ 0.18
HIST1H3AP68431 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.19■□□□□ 0.18
HIST1H3AP68431 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HIST1H3AP68431 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST1H3AP68431 HCG11-201ENST00000411553 5696 ntBASIC16.19■□□□□ 0.18
HIST1H3AP68431 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST1H3AP68431 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.19■□□□□ 0.18
HIST1H3AP68431 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.19■□□□□ 0.18
HIST1H3AP68431 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HIST1H3AP68431 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HIST1H3AP68431 MMP23A-201ENST00000234610 1017 ntBASIC16.19■□□□□ 0.18
HIST1H3AP68431 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST1H3AP68431 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HIST1H3AP68431 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.19■□□□□ 0.18
HIST1H3AP68431 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST1H3AP68431 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.19■□□□□ 0.18
HIST1H3AP68431 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.19■□□□□ 0.18
HIST1H3AP68431 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST1H3AP68431 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.19■□□□□ 0.18
HIST1H3AP68431 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
HIST1H3AP68431 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST1H3AP68431 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
HIST1H3AP68431 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST1H3AP68431 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST1H3AP68431 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST1H3AP68431 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
HIST1H3AP68431 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIST1H3AP68431 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
HIST1H3AP68431 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIST1H3AP68431 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
HIST1H3AP68431 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIST1H3AP68431 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HIST1H3AP68431 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.18■□□□□ 0.18
HIST1H3AP68431 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HIST1H3AP68431 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.18■□□□□ 0.18
HIST1H3AP68431 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HIST1H3AP68431 ABALON-201ENST00000629058 1903 ntBASIC16.18■□□□□ 0.18
HIST1H3AP68431 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIST1H3AP68431 INGX-201ENST00000359239 846 ntBASIC16.18■□□□□ 0.18
HIST1H3AP68431 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HIST1H3AP68431 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
HIST1H3AP68431 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
HIST1H3AP68431 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HIST1H3AP68431 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.18■□□□□ 0.18
HIST1H3AP68431 AL596275.1-201ENST00000423464 877 ntBASIC16.18■□□□□ 0.18
HIST1H3AP68431 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIST1H3AP68431 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.18■□□□□ 0.18
HIST1H3AP68431 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HIST1H3AP68431 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HIST1H3AP68431 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
HIST1H3AP68431 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIST1H3AP68431 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms