Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.12■□□□□ 0.01
SPCS3P61009 KLF2-202ENST00000592003 564 ntTSL 3 BASIC15.12■□□□□ 0.01
SPCS3P61009 AC083880.1-201ENST00000608266 535 ntBASIC15.12■□□□□ 0.01
SPCS3P61009 AC004264.1-201ENST00000608354 794 ntBASIC15.12■□□□□ 0.01
SPCS3P61009 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.12■□□□□ 0.01
SPCS3P61009 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC15.12■□□□□ 0.01
SPCS3P61009 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPCS3P61009 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SPCS3P61009 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC15.12■□□□□ 0.01
SPCS3P61009 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.12■□□□□ 0.01
SPCS3P61009 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPCS3P61009 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPCS3P61009 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.12■□□□□ 0.01
SPCS3P61009 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SPCS3P61009 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPCS3P61009 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPCS3P61009 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPCS3P61009 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPCS3P61009 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SPCS3P61009 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.12■□□□□ 0.01
SPCS3P61009 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SPCS3P61009 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPCS3P61009 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SPCS3P61009 RCC2P6-201ENST00000526625 1557 ntBASIC15.11■□□□□ 0.01
SPCS3P61009 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPCS3P61009 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPCS3P61009 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPCS3P61009 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPCS3P61009 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPCS3P61009 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
SPCS3P61009 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
SPCS3P61009 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPCS3P61009 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC15.11■□□□□ 0.01
SPCS3P61009 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
SPCS3P61009 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC15.11■□□□□ 0.01
SPCS3P61009 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC15.11■□□□□ 0.01
SPCS3P61009 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.11■□□□□ 0.01
SPCS3P61009 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SPCS3P61009 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPCS3P61009 AL138781.1-201ENST00000566567 1274 ntBASIC15.11■□□□□ 0.01
SPCS3P61009 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SPCS3P61009 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC15.11■□□□□ 0.01
SPCS3P61009 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC15.11■□□□□ 0.01
SPCS3P61009 MYC-208ENST00000641036 567 ntBASIC15.11■□□□□ 0.01
SPCS3P61009 NBPF21P-201ENST00000425093 1451 ntBASIC15.11■□□□□ 0.01
SPCS3P61009 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPCS3P61009 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPCS3P61009 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPCS3P61009 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
SPCS3P61009 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.11■□□□□ 0.01
SPCS3P61009 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SPCS3P61009 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.11■□□□□ 0.01
SPCS3P61009 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.11■□□□□ 0.01
SPCS3P61009 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPCS3P61009 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.11■□□□□ 0.01
SPCS3P61009 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.11■□□□□ 0.01
SPCS3P61009 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SPCS3P61009 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SPCS3P61009 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SPCS3P61009 AC068880.1-201ENST00000507289 2297 ntBASIC15.1■□□□□ 0.01
SPCS3P61009 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPCS3P61009 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPCS3P61009 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.1■□□□□ 0.01
SPCS3P61009 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
SPCS3P61009 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SPCS3P61009 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPCS3P61009 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SPCS3P61009 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPCS3P61009 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPCS3P61009 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SPCS3P61009 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.1■□□□□ 0.01
SPCS3P61009 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SPCS3P61009 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SPCS3P61009 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC15.1■□□□□ 0.01
SPCS3P61009 UNC93B4-201ENST00000505679 747 ntBASIC15.1■□□□□ 0.01
SPCS3P61009 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SPCS3P61009 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SPCS3P61009 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.1■□□□□ 0.01
SPCS3P61009 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SPCS3P61009 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPCS3P61009 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.1■□□□□ 0.01
SPCS3P61009 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPCS3P61009 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPCS3P61009 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
SPCS3P61009 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPCS3P61009 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
SPCS3P61009 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SPCS3P61009 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.1■□□□□ 0.01
SPCS3P61009 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.1■□□□□ 0.01
SPCS3P61009 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SPCS3P61009 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SPCS3P61009 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
SPCS3P61009 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
SPCS3P61009 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPCS3P61009 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPCS3P61009 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.09■□□□□ 0.01
SPCS3P61009 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPCS3P61009 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SPCS3P61009 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SPCS3P61009 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms