Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDC42P60953 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.98■□□□□ 0.31
CDC42P60953 AC022517.1-201ENST00000592429 346 ntBASIC16.98■□□□□ 0.31
CDC42P60953 AC120498.8-201ENST00000614275 531 ntBASIC16.98■□□□□ 0.31
CDC42P60953 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDC42P60953 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CDC42P60953 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDC42P60953 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDC42P60953 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.98■□□□□ 0.31
CDC42P60953 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CDC42P60953 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDC42P60953 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.98■□□□□ 0.31
CDC42P60953 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDC42P60953 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDC42P60953 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.98■□□□□ 0.31
CDC42P60953 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CDC42P60953 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDC42P60953 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDC42P60953 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.98■□□□□ 0.31
CDC42P60953 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDC42P60953 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.97■□□□□ 0.31
CDC42P60953 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.97■□□□□ 0.31
CDC42P60953 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDC42P60953 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDC42P60953 SIRPAP1-201ENST00000448467 1770 ntBASIC16.97■□□□□ 0.31
CDC42P60953 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
CDC42P60953 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDC42P60953 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDC42P60953 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.97■□□□□ 0.31
CDC42P60953 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.97■□□□□ 0.31
CDC42P60953 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDC42P60953 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDC42P60953 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
CDC42P60953 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.97■□□□□ 0.31
CDC42P60953 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CDC42P60953 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.97■□□□□ 0.31
CDC42P60953 AC139713.2-201ENST00000641328 2723 ntBASIC16.97■□□□□ 0.31
CDC42P60953 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.97■□□□□ 0.31
CDC42P60953 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDC42P60953 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.97■□□□□ 0.31
CDC42P60953 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
CDC42P60953 MIPEPP3-201ENST00000412105 444 ntBASIC16.97■□□□□ 0.31
CDC42P60953 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CDC42P60953 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.97■□□□□ 0.31
CDC42P60953 AC091874.3-201ENST00000512672 1195 ntBASIC16.97■□□□□ 0.31
CDC42P60953 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDC42P60953 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.97■□□□□ 0.31
CDC42P60953 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.97■□□□□ 0.31
CDC42P60953 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.97■□□□□ 0.31
CDC42P60953 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDC42P60953 HLA-B-256ENST00000639848 1089 ntBASIC16.97■□□□□ 0.31
CDC42P60953 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.97■□□□□ 0.31
CDC42P60953 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDC42P60953 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDC42P60953 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.97■□□□□ 0.31
CDC42P60953 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.97■□□□□ 0.31
CDC42P60953 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.97■□□□□ 0.31
CDC42P60953 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDC42P60953 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDC42P60953 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.96■□□□□ 0.31
CDC42P60953 KRT8P45-201ENST00000414328 1447 ntBASIC16.96■□□□□ 0.31
CDC42P60953 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
CDC42P60953 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
CDC42P60953 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDC42P60953 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.96■□□□□ 0.31
CDC42P60953 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDC42P60953 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDC42P60953 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CDC42P60953 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDC42P60953 OR6D1P-203ENST00000641209 4860 ntBASIC16.96■□□□□ 0.31
CDC42P60953 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDC42P60953 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDC42P60953 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDC42P60953 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CDC42P60953 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.96■□□□□ 0.31
CDC42P60953 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.96■□□□□ 0.31
CDC42P60953 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.96■□□□□ 0.31
CDC42P60953 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.96■□□□□ 0.31
CDC42P60953 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.96■□□□□ 0.31
CDC42P60953 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.96■□□□□ 0.31
CDC42P60953 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDC42P60953 AC092118.2-201ENST00000613495 667 ntBASIC16.96■□□□□ 0.31
CDC42P60953 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDC42P60953 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.96■□□□□ 0.31
CDC42P60953 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDC42P60953 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDC42P60953 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
CDC42P60953 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDC42P60953 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.3
CDC42P60953 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
CDC42P60953 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDC42P60953 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CDC42P60953 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDC42P60953 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDC42P60953 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDC42P60953 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDC42P60953 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDC42P60953 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
CDC42P60953 KRT8P32-201ENST00000512863 1461 ntBASIC16.95■□□□□ 0.3
CDC42P60953 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms