Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN12P56749 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN12P56749 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN12P56749 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CLDN12P56749 CROCCP5-201ENST00000436658 830 ntBASIC16.14■□□□□ 0.17
CLDN12P56749 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.14■□□□□ 0.17
CLDN12P56749 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.14■□□□□ 0.17
CLDN12P56749 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.14■□□□□ 0.17
CLDN12P56749 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.14■□□□□ 0.17
CLDN12P56749 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN12P56749 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.14■□□□□ 0.17
CLDN12P56749 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CLDN12P56749 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN12P56749 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN12P56749 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN12P56749 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN12P56749 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN12P56749 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
CLDN12P56749 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN12P56749 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN12P56749 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
CLDN12P56749 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN12P56749 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CLDN12P56749 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.13■□□□□ 0.17
CLDN12P56749 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.13■□□□□ 0.17
CLDN12P56749 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.13■□□□□ 0.17
CLDN12P56749 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CLDN12P56749 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CLDN12P56749 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN12P56749 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.13■□□□□ 0.17
CLDN12P56749 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CLDN12P56749 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN12P56749 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN12P56749 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN12P56749 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
CLDN12P56749 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN12P56749 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN12P56749 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN12P56749 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN12P56749 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN12P56749 AC026185.1-201ENST00000445748 174 ntBASIC16.13■□□□□ 0.17
CLDN12P56749 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.13■□□□□ 0.17
CLDN12P56749 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.13■□□□□ 0.17
CLDN12P56749 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.13■□□□□ 0.17
CLDN12P56749 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.13■□□□□ 0.17
CLDN12P56749 AC083906.2-201ENST00000511578 360 ntBASIC16.13■□□□□ 0.17
CLDN12P56749 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
CLDN12P56749 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.13■□□□□ 0.17
CLDN12P56749 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN12P56749 SOX15-203ENST00000570788 1093 ntBASIC16.13■□□□□ 0.17
CLDN12P56749 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.13■□□□□ 0.17
CLDN12P56749 AC092437.1-201ENST00000624794 1048 ntBASIC16.13■□□□□ 0.17
CLDN12P56749 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.13■□□□□ 0.17
CLDN12P56749 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.13■□□□□ 0.17
CLDN12P56749 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN12P56749 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN12P56749 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN12P56749 KRT8P41-201ENST00000533985 1514 ntBASIC16.13■□□□□ 0.17
CLDN12P56749 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CLDN12P56749 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN12P56749 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.13■□□□□ 0.17
CLDN12P56749 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.13■□□□□ 0.17
CLDN12P56749 AC009053.2-201ENST00000563701 2365 ntBASIC16.13■□□□□ 0.17
CLDN12P56749 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN12P56749 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN12P56749 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN12P56749 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN12P56749 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CLDN12P56749 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CLDN12P56749 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN12P56749 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CLDN12P56749 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.12■□□□□ 0.17
CLDN12P56749 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN12P56749 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CLDN12P56749 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CLDN12P56749 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN12P56749 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.12■□□□□ 0.17
CLDN12P56749 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN12P56749 PCDHA12-202ENST00000613593 2588 ntBASIC16.12■□□□□ 0.17
CLDN12P56749 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN12P56749 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
CLDN12P56749 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
CLDN12P56749 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.12■□□□□ 0.17
CLDN12P56749 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN12P56749 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.12■□□□□ 0.17
CLDN12P56749 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN12P56749 AC060766.5-201ENST00000590539 871 ntBASIC16.12■□□□□ 0.17
CLDN12P56749 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.12■□□□□ 0.17
CLDN12P56749 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.12■□□□□ 0.17
CLDN12P56749 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN12P56749 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.12■□□□□ 0.17
CLDN12P56749 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN12P56749 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN12P56749 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN12P56749 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN12P56749 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN12P56749 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN12P56749 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CLDN12P56749 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLDN12P56749 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms