Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH11P55287 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH11P55287 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CDH11P55287 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH11P55287 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.02■□□□□ 0.32
CDH11P55287 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CDH11P55287 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH11P55287 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.02■□□□□ 0.31
CDH11P55287 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH11P55287 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH11P55287 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH11P55287 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH11P55287 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH11P55287 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.01■□□□□ 0.31
CDH11P55287 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH11P55287 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH11P55287 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH11P55287 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH11P55287 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH11P55287 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH11P55287 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH11P55287 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH11P55287 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CDH11P55287 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CDH11P55287 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH11P55287 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH11P55287 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CDH11P55287 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CDH11P55287 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH11P55287 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH11P55287 ECEL1P3-201ENST00000427961 737 ntBASIC17.01■□□□□ 0.31
CDH11P55287 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH11P55287 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CDH11P55287 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.01■□□□□ 0.31
CDH11P55287 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.01■□□□□ 0.31
CDH11P55287 AL355075.4-201ENST00000554988 638 ntBASIC17.01■□□□□ 0.31
CDH11P55287 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.01■□□□□ 0.31
CDH11P55287 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CDH11P55287 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.01■□□□□ 0.31
CDH11P55287 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH11P55287 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH11P55287 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
CDH11P55287 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH11P55287 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH11P55287 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH11P55287 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH11P55287 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH11P55287 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
CDH11P55287 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CDH11P55287 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH11P55287 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH11P55287 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17■□□□□ 0.31
CDH11P55287 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17■□□□□ 0.31
CDH11P55287 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CDH11P55287 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDH11P55287 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDH11P55287 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17■□□□□ 0.31
CDH11P55287 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
CDH11P55287 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CDH11P55287 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17■□□□□ 0.31
CDH11P55287 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH11P55287 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH11P55287 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CDH11P55287 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CDH11P55287 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH11P55287 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH11P55287 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH11P55287 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH11P55287 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDH11P55287 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17■□□□□ 0.31
CDH11P55287 AC211429.1-201ENST00000415277 523 ntBASIC17■□□□□ 0.31
CDH11P55287 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17■□□□□ 0.31
CDH11P55287 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CDH11P55287 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17■□□□□ 0.31
CDH11P55287 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17■□□□□ 0.31
CDH11P55287 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
CDH11P55287 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDH11P55287 AP003071.4-201ENST00000562276 1284 ntBASIC17■□□□□ 0.31
CDH11P55287 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17■□□□□ 0.31
CDH11P55287 LINC01023-201ENST00000606054 436 ntBASIC17■□□□□ 0.31
CDH11P55287 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17■□□□□ 0.31
CDH11P55287 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17■□□□□ 0.31
CDH11P55287 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17■□□□□ 0.31
CDH11P55287 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CDH11P55287 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
CDH11P55287 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CDH11P55287 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH11P55287 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17■□□□□ 0.31
CDH11P55287 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17■□□□□ 0.31
CDH11P55287 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDH11P55287 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CDH11P55287 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17■□□□□ 0.31
CDH11P55287 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
CDH11P55287 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH11P55287 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.99■□□□□ 0.31
CDH11P55287 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.99■□□□□ 0.31
CDH11P55287 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH11P55287 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CDH11P55287 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CDH11P55287 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms