Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PSMD4P55036 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PSMD4P55036 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PSMD4P55036 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.27■□□□□ 0.36
PSMD4P55036 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PSMD4P55036 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PSMD4P55036 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.27■□□□□ 0.36
PSMD4P55036 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PSMD4P55036 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.27■□□□□ 0.36
PSMD4P55036 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PSMD4P55036 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.27■□□□□ 0.36
PSMD4P55036 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PSMD4P55036 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.27■□□□□ 0.36
PSMD4P55036 MIR3180-5-201ENST00000583743 153 ntBASIC17.27■□□□□ 0.36
PSMD4P55036 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.27■□□□□ 0.36
PSMD4P55036 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PSMD4P55036 AC073912.3-201ENST00000624414 853 ntBASIC17.27■□□□□ 0.36
PSMD4P55036 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.27■□□□□ 0.36
PSMD4P55036 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PSMD4P55036 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PSMD4P55036 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PSMD4P55036 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PSMD4P55036 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PSMD4P55036 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PSMD4P55036 AC112777.1-201ENST00000540175 1423 ntBASIC17.27■□□□□ 0.35
PSMD4P55036 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.27■□□□□ 0.35
PSMD4P55036 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
PSMD4P55036 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PSMD4P55036 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PSMD4P55036 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.27■□□□□ 0.35
PSMD4P55036 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
PSMD4P55036 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
PSMD4P55036 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PSMD4P55036 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PSMD4P55036 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PSMD4P55036 KRT18P22-201ENST00000402024 1347 ntBASIC17.26■□□□□ 0.35
PSMD4P55036 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PSMD4P55036 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PSMD4P55036 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PSMD4P55036 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.26■□□□□ 0.35
PSMD4P55036 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PSMD4P55036 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PSMD4P55036 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.26■□□□□ 0.35
PSMD4P55036 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PSMD4P55036 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PSMD4P55036 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.26■□□□□ 0.35
PSMD4P55036 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.26■□□□□ 0.35
PSMD4P55036 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.26■□□□□ 0.35
PSMD4P55036 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.26■□□□□ 0.35
PSMD4P55036 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PSMD4P55036 AC010947.1-201ENST00000623454 693 ntBASIC17.26■□□□□ 0.35
PSMD4P55036 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PSMD4P55036 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PSMD4P55036 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.26■□□□□ 0.35
PSMD4P55036 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PSMD4P55036 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.26■□□□□ 0.35
PSMD4P55036 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PSMD4P55036 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PSMD4P55036 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PSMD4P55036 LINC01568-207ENST00000641790 1380 ntBASIC17.26■□□□□ 0.35
PSMD4P55036 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.26■□□□□ 0.35
PSMD4P55036 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.26■□□□□ 0.35
PSMD4P55036 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
PSMD4P55036 AC026471.1-201ENST00000564629 3026 ntBASIC17.26■□□□□ 0.35
PSMD4P55036 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PSMD4P55036 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PSMD4P55036 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PSMD4P55036 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PSMD4P55036 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PSMD4P55036 CYP2D8P-201ENST00000433633 1490 ntBASIC17.25■□□□□ 0.35
PSMD4P55036 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.25■□□□□ 0.35
PSMD4P55036 AC008556.1-201ENST00000610908 2040 ntBASIC17.25■□□□□ 0.35
PSMD4P55036 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PSMD4P55036 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PSMD4P55036 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PSMD4P55036 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.25■□□□□ 0.35
PSMD4P55036 WIZP1-201ENST00000531444 2299 ntBASIC17.25■□□□□ 0.35
PSMD4P55036 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.25■□□□□ 0.35
PSMD4P55036 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.25■□□□□ 0.35
PSMD4P55036 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PSMD4P55036 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PSMD4P55036 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PSMD4P55036 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.25■□□□□ 0.35
PSMD4P55036 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.25■□□□□ 0.35
PSMD4P55036 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
PSMD4P55036 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PSMD4P55036 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.25■□□□□ 0.35
PSMD4P55036 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PSMD4P55036 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PSMD4P55036 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PSMD4P55036 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PSMD4P55036 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PSMD4P55036 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PSMD4P55036 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PSMD4P55036 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.24■□□□□ 0.35
PSMD4P55036 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.24■□□□□ 0.35
PSMD4P55036 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PSMD4P55036 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.24■□□□□ 0.35
PSMD4P55036 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PSMD4P55036 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms