Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF140P52738 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF140P52738 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.46■□□□□ 0.55
ZNF140P52738 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF140P52738 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF140P52738 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.46■□□□□ 0.55
ZNF140P52738 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.46■□□□□ 0.55
ZNF140P52738 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF140P52738 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF140P52738 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ZNF140P52738 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
ZNF140P52738 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
ZNF140P52738 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.46■□□□□ 0.54
ZNF140P52738 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF140P52738 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF140P52738 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.45■□□□□ 0.54
ZNF140P52738 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF140P52738 AC135050.7-201ENST00000624508 2218 ntBASIC18.45■□□□□ 0.54
ZNF140P52738 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF140P52738 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF140P52738 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF140P52738 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF140P52738 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.45■□□□□ 0.54
ZNF140P52738 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.45■□□□□ 0.54
ZNF140P52738 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.45■□□□□ 0.54
ZNF140P52738 MIR3180-4-201ENST00000582223 153 ntBASIC18.45■□□□□ 0.54
ZNF140P52738 AC024243.1-201ENST00000609234 778 ntBASIC18.45■□□□□ 0.54
ZNF140P52738 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.45■□□□□ 0.54
ZNF140P52738 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.45■□□□□ 0.54
ZNF140P52738 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
ZNF140P52738 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
ZNF140P52738 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF140P52738 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
ZNF140P52738 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
ZNF140P52738 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF140P52738 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF140P52738 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.45■□□□□ 0.54
ZNF140P52738 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF140P52738 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.45■□□□□ 0.54
ZNF140P52738 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF140P52738 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ZNF140P52738 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.44■□□□□ 0.54
ZNF140P52738 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF140P52738 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF140P52738 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF140P52738 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.44■□□□□ 0.54
ZNF140P52738 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF140P52738 SDHAP2-201ENST00000455183 2001 ntBASIC18.44■□□□□ 0.54
ZNF140P52738 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
ZNF140P52738 AL162741.1-201ENST00000565563 1558 ntBASIC18.44■□□□□ 0.54
ZNF140P52738 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.44■□□□□ 0.54
ZNF140P52738 TERF1P1-201ENST00000311003 1181 ntBASIC18.44■□□□□ 0.54
ZNF140P52738 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.44■□□□□ 0.54
ZNF140P52738 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF140P52738 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.44■□□□□ 0.54
ZNF140P52738 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.44■□□□□ 0.54
ZNF140P52738 MIR149-201ENST00000384879 89 ntBASIC18.44■□□□□ 0.54
ZNF140P52738 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.44■□□□□ 0.54
ZNF140P52738 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
ZNF140P52738 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF140P52738 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
ZNF140P52738 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF140P52738 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.44■□□□□ 0.54
ZNF140P52738 AC010240.3-201ENST00000607688 395 ntBASIC18.44■□□□□ 0.54
ZNF140P52738 AC005363.2-201ENST00000618631 242 ntBASIC18.44■□□□□ 0.54
ZNF140P52738 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF140P52738 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF140P52738 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.44■□□□□ 0.54
ZNF140P52738 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.44■□□□□ 0.54
ZNF140P52738 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF140P52738 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.44■□□□□ 0.54
ZNF140P52738 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.44■□□□□ 0.54
ZNF140P52738 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF140P52738 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF140P52738 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF140P52738 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF140P52738 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF140P52738 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF140P52738 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
ZNF140P52738 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ZNF140P52738 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF140P52738 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF140P52738 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.43■□□□□ 0.54
ZNF140P52738 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF140P52738 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF140P52738 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF140P52738 AC099343.3-201ENST00000605834 2503 ntBASIC18.43■□□□□ 0.54
ZNF140P52738 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF140P52738 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF140P52738 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
ZNF140P52738 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF140P52738 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
ZNF140P52738 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.43■□□□□ 0.54
ZNF140P52738 AP000523.1-201ENST00000398242 1049 ntBASIC18.43■□□□□ 0.54
ZNF140P52738 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.43■□□□□ 0.54
ZNF140P52738 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.43■□□□□ 0.54
ZNF140P52738 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.43■□□□□ 0.54
ZNF140P52738 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.43■□□□□ 0.54
ZNF140P52738 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
ZNF140P52738 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms