Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AL133373.2-201ENST00000623187 2828 ntBASIC19.12■□□□□ 0.65
NEK3P51956 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEK3P51956 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
NEK3P51956 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NEK3P51956 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEK3P51956 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEK3P51956 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.11■□□□□ 0.65
NEK3P51956 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
NEK3P51956 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.11■□□□□ 0.65
NEK3P51956 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEK3P51956 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEK3P51956 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEK3P51956 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
NEK3P51956 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
NEK3P51956 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
NEK3P51956 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEK3P51956 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.11■□□□□ 0.65
NEK3P51956 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.11■□□□□ 0.65
NEK3P51956 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.11■□□□□ 0.65
NEK3P51956 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NEK3P51956 AL590326.2-201ENST00000625139 305 ntBASIC19.11■□□□□ 0.65
NEK3P51956 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NEK3P51956 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NEK3P51956 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEK3P51956 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
NEK3P51956 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NEK3P51956 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.11■□□□□ 0.65
NEK3P51956 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NEK3P51956 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
NEK3P51956 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.11■□□□□ 0.65
NEK3P51956 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NEK3P51956 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.11■□□□□ 0.65
NEK3P51956 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEK3P51956 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEK3P51956 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
NEK3P51956 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEK3P51956 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.1■□□□□ 0.65
NEK3P51956 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEK3P51956 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NEK3P51956 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
NEK3P51956 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NEK3P51956 NOC2LP2-201ENST00000407594 1944 ntBASIC19.1■□□□□ 0.65
NEK3P51956 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
NEK3P51956 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.1■□□□□ 0.65
NEK3P51956 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEK3P51956 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEK3P51956 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NEK3P51956 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEK3P51956 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEK3P51956 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NEK3P51956 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEK3P51956 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
NEK3P51956 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEK3P51956 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEK3P51956 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEK3P51956 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEK3P51956 AC104076.2-201ENST00000448912 469 ntBASIC19.1■□□□□ 0.65
NEK3P51956 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NEK3P51956 DUX4L26-201ENST00000489078 1255 ntBASIC19.1■□□□□ 0.65
NEK3P51956 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.1■□□□□ 0.65
NEK3P51956 AC006011.2-201ENST00000621313 1158 ntBASIC19.1■□□□□ 0.65
NEK3P51956 AL138966.2-201ENST00000621997 464 ntBASIC19.1■□□□□ 0.65
NEK3P51956 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
NEK3P51956 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.1■□□□□ 0.65
NEK3P51956 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
NEK3P51956 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.1■□□□□ 0.65
NEK3P51956 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.1■□□□□ 0.65
NEK3P51956 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NEK3P51956 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEK3P51956 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEK3P51956 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.09■□□□□ 0.65
NEK3P51956 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.09■□□□□ 0.65
NEK3P51956 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEK3P51956 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NEK3P51956 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEK3P51956 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.09■□□□□ 0.65
NEK3P51956 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NEK3P51956 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEK3P51956 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.09■□□□□ 0.65
NEK3P51956 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEK3P51956 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEK3P51956 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEK3P51956 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.09■□□□□ 0.65
NEK3P51956 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NEK3P51956 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
NEK3P51956 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.09■□□□□ 0.65
NEK3P51956 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.09■□□□□ 0.65
NEK3P51956 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEK3P51956 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEK3P51956 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
NEK3P51956 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
NEK3P51956 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.09■□□□□ 0.65
NEK3P51956 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.09■□□□□ 0.65
NEK3P51956 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEK3P51956 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
NEK3P51956 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.09■□□□□ 0.65
NEK3P51956 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
NEK3P51956 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEK3P51956 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NEK3P51956 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms