Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC010240.3-201ENST00000607688 395 ntBASIC18.18■□□□□ 0.5
CLCNKAP51800 AC083849.1-201ENST00000615227 514 ntBASIC18.18■□□□□ 0.5
CLCNKAP51800 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CLCNKAP51800 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLCNKAP51800 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCNKAP51800 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCNKAP51800 AP000974.1-201ENST00000623909 2387 ntBASIC18.18■□□□□ 0.5
CLCNKAP51800 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCNKAP51800 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLCNKAP51800 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCNKAP51800 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.18■□□□□ 0.5
CLCNKAP51800 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLCNKAP51800 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLCNKAP51800 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.17■□□□□ 0.5
CLCNKAP51800 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLCNKAP51800 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLCNKAP51800 LINC01311-201ENST00000565162 1445 ntBASIC18.17■□□□□ 0.5
CLCNKAP51800 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CLCNKAP51800 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLCNKAP51800 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLCNKAP51800 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.17■□□□□ 0.5
CLCNKAP51800 AP000593.1-201ENST00000393668 712 ntBASIC18.17■□□□□ 0.5
CLCNKAP51800 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLCNKAP51800 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLCNKAP51800 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.17■□□□□ 0.5
CLCNKAP51800 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLCNKAP51800 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.17■□□□□ 0.5
CLCNKAP51800 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLCNKAP51800 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLCNKAP51800 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLCNKAP51800 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.17■□□□□ 0.5
CLCNKAP51800 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLCNKAP51800 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLCNKAP51800 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLCNKAP51800 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLCNKAP51800 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLCNKAP51800 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CLCNKAP51800 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCNKAP51800 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.16■□□□□ 0.5
CLCNKAP51800 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCNKAP51800 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.16■□□□□ 0.5
CLCNKAP51800 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CLCNKAP51800 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCNKAP51800 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCNKAP51800 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCNKAP51800 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCNKAP51800 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.16■□□□□ 0.5
CLCNKAP51800 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.16■□□□□ 0.5
CLCNKAP51800 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLCNKAP51800 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCNKAP51800 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCNKAP51800 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.16■□□□□ 0.5
CLCNKAP51800 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLCNKAP51800 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCNKAP51800 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.16■□□□□ 0.5
CLCNKAP51800 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.16■□□□□ 0.5
CLCNKAP51800 AC009065.1-201ENST00000564055 1225 ntBASIC18.16■□□□□ 0.5
CLCNKAP51800 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCNKAP51800 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCNKAP51800 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
CLCNKAP51800 AP000550.4-202ENST00000639755 178 ntBASIC18.16■□□□□ 0.5
CLCNKAP51800 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCNKAP51800 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCNKAP51800 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLCNKAP51800 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CLCNKAP51800 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CLCNKAP51800 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCNKAP51800 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLCNKAP51800 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCNKAP51800 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCNKAP51800 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCNKAP51800 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CLCNKAP51800 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLCNKAP51800 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLCNKAP51800 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCNKAP51800 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.15■□□□□ 0.5
CLCNKAP51800 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLCNKAP51800 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCNKAP51800 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCNKAP51800 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CLCNKAP51800 AC087289.5-201ENST00000586076 3175 ntBASIC18.15■□□□□ 0.5
CLCNKAP51800 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCNKAP51800 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.15■□□□□ 0.5
CLCNKAP51800 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CLCNKAP51800 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLCNKAP51800 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.15■□□□□ 0.5
CLCNKAP51800 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
CLCNKAP51800 HLA-F-220ENST00000434407 884 ntBASIC18.15■□□□□ 0.5
CLCNKAP51800 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.15■□□□□ 0.5
CLCNKAP51800 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.15■□□□□ 0.5
CLCNKAP51800 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.15■□□□□ 0.5
CLCNKAP51800 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.15■□□□□ 0.5
CLCNKAP51800 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.15■□□□□ 0.5
CLCNKAP51800 AL157888.1-201ENST00000631930 593 ntBASIC18.15■□□□□ 0.5
CLCNKAP51800 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.15■□□□□ 0.5
CLCNKAP51800 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLCNKAP51800 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.15■□□□□ 0.5
CLCNKAP51800 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCNKAP51800 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCNKAP51800 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms