Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF144AP50876 AL390961.4-201ENST00000623958 2535 ntBASIC17.26■□□□□ 0.35
RNF144AP50876 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF144AP50876 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RNF144AP50876 FZD10-202ENST00000539839 3282 ntBASIC17.26■□□□□ 0.35
RNF144AP50876 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF144AP50876 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF144AP50876 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RNF144AP50876 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
RNF144AP50876 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF144AP50876 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RNF144AP50876 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.26■□□□□ 0.35
RNF144AP50876 AL357033.4-201ENST00000617703 1807 ntBASIC17.26■□□□□ 0.35
RNF144AP50876 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF144AP50876 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF144AP50876 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF144AP50876 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF144AP50876 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF144AP50876 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF144AP50876 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF144AP50876 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
RNF144AP50876 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.25■□□□□ 0.35
RNF144AP50876 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF144AP50876 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF144AP50876 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF144AP50876 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF144AP50876 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.25■□□□□ 0.35
RNF144AP50876 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
RNF144AP50876 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF144AP50876 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF144AP50876 MIR4674-201ENST00000582457 87 ntBASIC17.25■□□□□ 0.35
RNF144AP50876 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.25■□□□□ 0.35
RNF144AP50876 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF144AP50876 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.25■□□□□ 0.35
RNF144AP50876 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF144AP50876 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.25■□□□□ 0.35
RNF144AP50876 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RNF144AP50876 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF144AP50876 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
RNF144AP50876 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF144AP50876 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF144AP50876 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF144AP50876 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF144AP50876 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF144AP50876 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF144AP50876 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF144AP50876 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF144AP50876 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
RNF144AP50876 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF144AP50876 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF144AP50876 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF144AP50876 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.24■□□□□ 0.35
RNF144AP50876 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF144AP50876 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF144AP50876 AC090164.3-201ENST00000610780 2143 ntBASIC17.24■□□□□ 0.35
RNF144AP50876 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF144AP50876 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF144AP50876 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF144AP50876 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF144AP50876 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF144AP50876 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF144AP50876 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF144AP50876 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF144AP50876 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF144AP50876 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF144AP50876 INGX-201ENST00000359239 846 ntBASIC17.24■□□□□ 0.35
RNF144AP50876 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF144AP50876 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RNF144AP50876 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF144AP50876 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.24■□□□□ 0.35
RNF144AP50876 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF144AP50876 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
RNF144AP50876 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF144AP50876 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF144AP50876 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF144AP50876 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF144AP50876 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF144AP50876 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RNF144AP50876 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF144AP50876 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF144AP50876 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF144AP50876 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF144AP50876 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RNF144AP50876 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RNF144AP50876 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF144AP50876 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF144AP50876 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF144AP50876 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF144AP50876 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF144AP50876 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF144AP50876 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RNF144AP50876 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF144AP50876 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RNF144AP50876 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF144AP50876 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF144AP50876 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF144AP50876 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF144AP50876 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RNF144AP50876 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF144AP50876 AL023284.2-201ENST00000405850 579 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms