Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
THBS4P35443 AC090340.1-201ENST00000620778 4980 ntBASIC16.33■□□□□ 0.2
THBS4P35443 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
THBS4P35443 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THBS4P35443 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
THBS4P35443 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THBS4P35443 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
THBS4P35443 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THBS4P35443 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
THBS4P35443 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THBS4P35443 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THBS4P35443 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
THBS4P35443 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
THBS4P35443 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.32■□□□□ 0.2
THBS4P35443 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.32■□□□□ 0.2
THBS4P35443 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
THBS4P35443 AP003041.3-201ENST00000527151 707 ntBASIC16.32■□□□□ 0.2
THBS4P35443 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.32■□□□□ 0.2
THBS4P35443 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
THBS4P35443 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.32■□□□□ 0.2
THBS4P35443 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.32■□□□□ 0.2
THBS4P35443 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.32■□□□□ 0.2
THBS4P35443 AC073508.3-201ENST00000619697 1419 ntBASIC16.32■□□□□ 0.2
THBS4P35443 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.32■□□□□ 0.2
THBS4P35443 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
THBS4P35443 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
THBS4P35443 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.31■□□□□ 0.2
THBS4P35443 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THBS4P35443 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THBS4P35443 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
THBS4P35443 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
THBS4P35443 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
THBS4P35443 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THBS4P35443 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.31■□□□□ 0.2
THBS4P35443 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THBS4P35443 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
THBS4P35443 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.31■□□□□ 0.2
THBS4P35443 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
THBS4P35443 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
THBS4P35443 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.31■□□□□ 0.2
THBS4P35443 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
THBS4P35443 MIR1224-201ENST00000408193 85 ntBASIC16.31■□□□□ 0.2
THBS4P35443 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
THBS4P35443 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.31■□□□□ 0.2
THBS4P35443 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.31■□□□□ 0.2
THBS4P35443 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.31■□□□□ 0.2
THBS4P35443 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.31■□□□□ 0.2
THBS4P35443 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.31■□□□□ 0.2
THBS4P35443 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
THBS4P35443 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.31■□□□□ 0.2
THBS4P35443 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.31■□□□□ 0.2
THBS4P35443 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.31■□□□□ 0.2
THBS4P35443 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
THBS4P35443 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.31■□□□□ 0.2
THBS4P35443 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THBS4P35443 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
THBS4P35443 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.31■□□□□ 0.2
THBS4P35443 AC135050.7-201ENST00000624508 2218 ntBASIC16.31■□□□□ 0.2
THBS4P35443 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
THBS4P35443 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
THBS4P35443 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
THBS4P35443 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
THBS4P35443 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
THBS4P35443 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.31■□□□□ 0.2
THBS4P35443 AC007613.1-201ENST00000572811 2597 ntBASIC16.31■□□□□ 0.2
THBS4P35443 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.3■□□□□ 0.2
THBS4P35443 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THBS4P35443 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THBS4P35443 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.3■□□□□ 0.2
THBS4P35443 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
THBS4P35443 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
THBS4P35443 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
THBS4P35443 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THBS4P35443 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.3■□□□□ 0.2
THBS4P35443 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.3■□□□□ 0.2
THBS4P35443 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.3■□□□□ 0.2
THBS4P35443 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
THBS4P35443 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.3■□□□□ 0.2
THBS4P35443 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THBS4P35443 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.3■□□□□ 0.2
THBS4P35443 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.3■□□□□ 0.2
THBS4P35443 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.3■□□□□ 0.2
THBS4P35443 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.3■□□□□ 0.2
THBS4P35443 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.3■□□□□ 0.2
THBS4P35443 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
THBS4P35443 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.3■□□□□ 0.2
THBS4P35443 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THBS4P35443 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.3■□□□□ 0.2
THBS4P35443 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THBS4P35443 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
THBS4P35443 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THBS4P35443 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
THBS4P35443 HEIH-201ENST00000623091 1652 ntBASIC16.3■□□□□ 0.2
THBS4P35443 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
THBS4P35443 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
THBS4P35443 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
THBS4P35443 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
THBS4P35443 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
THBS4P35443 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
THBS4P35443 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms