Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RORAP35398 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.61■□□□□ 0.41
RORAP35398 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RORAP35398 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RORAP35398 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RORAP35398 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RORAP35398 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.6■□□□□ 0.41
RORAP35398 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.6■□□□□ 0.41
RORAP35398 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RORAP35398 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.6■□□□□ 0.41
RORAP35398 ATP5G2P1-201ENST00000433580 426 ntBASIC17.6■□□□□ 0.41
RORAP35398 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RORAP35398 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.6■□□□□ 0.41
RORAP35398 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.6■□□□□ 0.41
RORAP35398 AL136038.4-201ENST00000603606 1261 ntBASIC17.6■□□□□ 0.41
RORAP35398 AC010240.3-201ENST00000607688 395 ntBASIC17.6■□□□□ 0.41
RORAP35398 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.6■□□□□ 0.41
RORAP35398 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.6■□□□□ 0.41
RORAP35398 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.6■□□□□ 0.41
RORAP35398 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RORAP35398 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RORAP35398 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.6■□□□□ 0.41
RORAP35398 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RORAP35398 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.6■□□□□ 0.41
RORAP35398 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RORAP35398 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RORAP35398 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.6■□□□□ 0.41
RORAP35398 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RORAP35398 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RORAP35398 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RORAP35398 AL391807.1-203ENST00000604392 2365 ntBASIC17.59■□□□□ 0.41
RORAP35398 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.59■□□□□ 0.41
RORAP35398 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RORAP35398 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.59■□□□□ 0.41
RORAP35398 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RORAP35398 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RORAP35398 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.59■□□□□ 0.41
RORAP35398 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.59■□□□□ 0.41
RORAP35398 AC034236.2-201ENST00000606662 1610 ntBASIC17.59■□□□□ 0.41
RORAP35398 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RORAP35398 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RORAP35398 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RORAP35398 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.59■□□□□ 0.41
RORAP35398 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RORAP35398 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.59■□□□□ 0.41
RORAP35398 HCG4P8-203ENST00000443049 980 ntBASIC17.59■□□□□ 0.41
RORAP35398 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.59■□□□□ 0.41
RORAP35398 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.59■□□□□ 0.41
RORAP35398 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.59■□□□□ 0.41
RORAP35398 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.59■□□□□ 0.41
RORAP35398 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.59■□□□□ 0.41
RORAP35398 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RORAP35398 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RORAP35398 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.59■□□□□ 0.41
RORAP35398 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RORAP35398 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RORAP35398 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RORAP35398 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RORAP35398 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RORAP35398 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RORAP35398 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RORAP35398 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.58■□□□□ 0.41
RORAP35398 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RORAP35398 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
RORAP35398 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.58■□□□□ 0.41
RORAP35398 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RORAP35398 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RORAP35398 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
RORAP35398 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RORAP35398 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RORAP35398 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RORAP35398 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.58■□□□□ 0.41
RORAP35398 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RORAP35398 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RORAP35398 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RORAP35398 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.58■□□□□ 0.4
RORAP35398 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RORAP35398 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RORAP35398 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.58■□□□□ 0.4
RORAP35398 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RORAP35398 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RORAP35398 AC011498.5-201ENST00000592027 486 ntBASIC17.58■□□□□ 0.4
RORAP35398 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RORAP35398 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
RORAP35398 NPAP1P7-201ENST00000613027 823 ntBASIC17.58■□□□□ 0.4
RORAP35398 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.58■□□□□ 0.4
RORAP35398 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.58■□□□□ 0.4
RORAP35398 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.58■□□□□ 0.4
RORAP35398 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RORAP35398 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RORAP35398 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
RORAP35398 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RORAP35398 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
RORAP35398 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RORAP35398 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
RORAP35398 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.58■□□□□ 0.4
RORAP35398 AL162741.1-201ENST00000565563 1558 ntBASIC17.57■□□□□ 0.4
RORAP35398 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RORAP35398 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RORAP35398 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms