Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS2P33552 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS2P33552 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS2P33552 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC13.66□□□□□ -0.22
CKS2P33552 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS2P33552 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
CKS2P33552 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS2P33552 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC13.66□□□□□ -0.22
CKS2P33552 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC13.66□□□□□ -0.22
CKS2P33552 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CKS2P33552 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.66□□□□□ -0.22
CKS2P33552 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC13.66□□□□□ -0.22
CKS2P33552 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC13.66□□□□□ -0.22
CKS2P33552 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS2P33552 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CKS2P33552 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CKS2P33552 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CKS2P33552 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CKS2P33552 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS2P33552 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CKS2P33552 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CKS2P33552 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC13.66□□□□□ -0.22
CKS2P33552 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS2P33552 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CKS2P33552 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CKS2P33552 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CKS2P33552 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
CKS2P33552 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CKS2P33552 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CKS2P33552 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CKS2P33552 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CKS2P33552 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CKS2P33552 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
CKS2P33552 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CKS2P33552 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CKS2P33552 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CKS2P33552 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CKS2P33552 AC069236.1-201ENST00000604339 616 ntBASIC13.65□□□□□ -0.22
CKS2P33552 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC13.65□□□□□ -0.22
CKS2P33552 AC008694.1-202ENST00000636953 945 ntBASIC13.65□□□□□ -0.22
CKS2P33552 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CKS2P33552 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CKS2P33552 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CKS2P33552 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC13.65□□□□□ -0.22
CKS2P33552 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CKS2P33552 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CKS2P33552 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CKS2P33552 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CKS2P33552 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CKS2P33552 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CKS2P33552 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CKS2P33552 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CKS2P33552 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CKS2P33552 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.23
CKS2P33552 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CKS2P33552 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CKS2P33552 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC13.64□□□□□ -0.23
CKS2P33552 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC13.64□□□□□ -0.23
CKS2P33552 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC13.64□□□□□ -0.23
CKS2P33552 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC13.64□□□□□ -0.23
CKS2P33552 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CKS2P33552 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CKS2P33552 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CKS2P33552 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CKS2P33552 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CKS2P33552 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CKS2P33552 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC13.64□□□□□ -0.23
CKS2P33552 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CKS2P33552 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CKS2P33552 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC13.64□□□□□ -0.23
CKS2P33552 AL390719.1-204ENST00000412397 1219 ntBASIC13.64□□□□□ -0.23
CKS2P33552 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC13.64□□□□□ -0.23
CKS2P33552 NALT1-201ENST00000429224 738 ntTSL 5 BASIC13.64□□□□□ -0.23
CKS2P33552 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC13.64□□□□□ -0.23
CKS2P33552 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC13.64□□□□□ -0.23
CKS2P33552 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC13.64□□□□□ -0.23
CKS2P33552 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CKS2P33552 MYC-208ENST00000641036 567 ntBASIC13.64□□□□□ -0.23
CKS2P33552 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CKS2P33552 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CKS2P33552 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CKS2P33552 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CKS2P33552 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CKS2P33552 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CKS2P33552 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CKS2P33552 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CKS2P33552 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CKS2P33552 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
CKS2P33552 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
CKS2P33552 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CKS2P33552 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CKS2P33552 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.64□□□□□ -0.23
CKS2P33552 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CKS2P33552 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CKS2P33552 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CKS2P33552 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CKS2P33552 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CKS2P33552 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC13.63□□□□□ -0.23
CKS2P33552 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CKS2P33552 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms