Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SHC1P29353 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.01■□□□□ 0.31
SHC1P29353 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SHC1P29353 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SHC1P29353 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.01■□□□□ 0.31
SHC1P29353 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SHC1P29353 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SHC1P29353 BICD1-207ENST00000551848 1962 ntBASIC17■□□□□ 0.31
SHC1P29353 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHC1P29353 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
SHC1P29353 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHC1P29353 KATNBL1P6-202ENST00000562413 1466 ntBASIC17■□□□□ 0.31
SHC1P29353 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17■□□□□ 0.31
SHC1P29353 Z98044.1-201ENST00000632503 1764 ntBASIC17■□□□□ 0.31
SHC1P29353 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SHC1P29353 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHC1P29353 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHC1P29353 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
SHC1P29353 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHC1P29353 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SHC1P29353 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17■□□□□ 0.31
SHC1P29353 AC007663.1-201ENST00000438948 1240 ntBASIC17■□□□□ 0.31
SHC1P29353 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17■□□□□ 0.31
SHC1P29353 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17■□□□□ 0.31
SHC1P29353 AP003041.3-201ENST00000527151 707 ntBASIC17■□□□□ 0.31
SHC1P29353 DUT-205ENST00000558813 769 ntTSL 2 BASIC17■□□□□ 0.31
SHC1P29353 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17■□□□□ 0.31
SHC1P29353 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
SHC1P29353 AC145285.6-201ENST00000604632 637 ntBASIC17■□□□□ 0.31
SHC1P29353 FAM87A-204ENST00000613235 858 ntBASIC17■□□□□ 0.31
SHC1P29353 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
SHC1P29353 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17■□□□□ 0.31
SHC1P29353 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17■□□□□ 0.31
SHC1P29353 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17■□□□□ 0.31
SHC1P29353 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHC1P29353 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SHC1P29353 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHC1P29353 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SHC1P29353 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHC1P29353 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SHC1P29353 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHC1P29353 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHC1P29353 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHC1P29353 AC093525.10-201ENST00000625130 1569 ntBASIC16.99■□□□□ 0.31
SHC1P29353 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.99■□□□□ 0.31
SHC1P29353 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SHC1P29353 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHC1P29353 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.99■□□□□ 0.31
SHC1P29353 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHC1P29353 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.99■□□□□ 0.31
SHC1P29353 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.99■□□□□ 0.31
SHC1P29353 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.99■□□□□ 0.31
SHC1P29353 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.99■□□□□ 0.31
SHC1P29353 AL353719.1-201ENST00000566847 864 ntBASIC16.99■□□□□ 0.31
SHC1P29353 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.99■□□□□ 0.31
SHC1P29353 AC097493.4-201ENST00000641197 219 ntBASIC16.99■□□□□ 0.31
SHC1P29353 AC116562.4-202ENST00000641738 218 ntBASIC16.99■□□□□ 0.31
SHC1P29353 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHC1P29353 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SHC1P29353 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.99■□□□□ 0.31
SHC1P29353 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.99■□□□□ 0.31
SHC1P29353 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SHC1P29353 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SHC1P29353 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHC1P29353 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHC1P29353 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHC1P29353 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHC1P29353 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHC1P29353 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHC1P29353 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHC1P29353 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHC1P29353 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SHC1P29353 GPAT2P1-201ENST00000444924 1672 ntBASIC16.98■□□□□ 0.31
SHC1P29353 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.98■□□□□ 0.31
SHC1P29353 FZD10-202ENST00000539839 3282 ntBASIC16.98■□□□□ 0.31
SHC1P29353 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHC1P29353 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.98■□□□□ 0.31
SHC1P29353 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHC1P29353 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHC1P29353 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.98■□□□□ 0.31
SHC1P29353 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.98■□□□□ 0.31
SHC1P29353 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SHC1P29353 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SHC1P29353 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SHC1P29353 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.98■□□□□ 0.31
SHC1P29353 CCR12P-201ENST00000446203 998 ntBASIC16.98■□□□□ 0.31
SHC1P29353 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
SHC1P29353 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.98■□□□□ 0.31
SHC1P29353 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SHC1P29353 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.98■□□□□ 0.31
SHC1P29353 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.98■□□□□ 0.31
SHC1P29353 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHC1P29353 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SHC1P29353 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SHC1P29353 AL354751.1-201ENST00000412768 1863 ntBASIC16.98■□□□□ 0.31
SHC1P29353 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHC1P29353 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHC1P29353 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHC1P29353 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.98■□□□□ 0.31
SHC1P29353 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms