Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN3P20807 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.88■□□□□ 0.45
CAPN3P20807 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN3P20807 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.88■□□□□ 0.45
CAPN3P20807 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CAPN3P20807 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
CAPN3P20807 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN3P20807 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN3P20807 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN3P20807 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN3P20807 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.87■□□□□ 0.45
CAPN3P20807 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN3P20807 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN3P20807 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN3P20807 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.87■□□□□ 0.45
CAPN3P20807 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.87■□□□□ 0.45
CAPN3P20807 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.87■□□□□ 0.45
CAPN3P20807 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN3P20807 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN3P20807 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.87■□□□□ 0.45
CAPN3P20807 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.87■□□□□ 0.45
CAPN3P20807 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.87■□□□□ 0.45
CAPN3P20807 AL049637.2-201ENST00000641778 930 ntBASIC17.87■□□□□ 0.45
CAPN3P20807 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.87■□□□□ 0.45
CAPN3P20807 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CAPN3P20807 KRT8P11-201ENST00000409686 1436 ntBASIC17.87■□□□□ 0.45
CAPN3P20807 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.87■□□□□ 0.45
CAPN3P20807 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.87■□□□□ 0.45
CAPN3P20807 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN3P20807 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CAPN3P20807 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN3P20807 AC093677.2-201ENST00000600169 1863 ntBASIC17.86■□□□□ 0.45
CAPN3P20807 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.86■□□□□ 0.45
CAPN3P20807 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN3P20807 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CAPN3P20807 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CAPN3P20807 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CAPN3P20807 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.86■□□□□ 0.45
CAPN3P20807 TSPY7P-201ENST00000431358 1114 ntBASIC17.86■□□□□ 0.45
CAPN3P20807 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN3P20807 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.86■□□□□ 0.45
CAPN3P20807 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.86■□□□□ 0.45
CAPN3P20807 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN3P20807 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.86■□□□□ 0.45
CAPN3P20807 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
CAPN3P20807 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.86■□□□□ 0.45
CAPN3P20807 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.86■□□□□ 0.45
CAPN3P20807 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.86■□□□□ 0.45
CAPN3P20807 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.86■□□□□ 0.45
CAPN3P20807 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.86■□□□□ 0.45
CAPN3P20807 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.86■□□□□ 0.45
CAPN3P20807 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.86■□□□□ 0.45
CAPN3P20807 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.86■□□□□ 0.45
CAPN3P20807 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN3P20807 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.86■□□□□ 0.45
CAPN3P20807 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN3P20807 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN3P20807 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN3P20807 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CAPN3P20807 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN3P20807 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CAPN3P20807 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN3P20807 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CAPN3P20807 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN3P20807 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN3P20807 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
CAPN3P20807 RCN1P1-201ENST00000400413 996 ntBASIC17.85■□□□□ 0.45
CAPN3P20807 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.85■□□□□ 0.45
CAPN3P20807 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.85■□□□□ 0.45
CAPN3P20807 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.85■□□□□ 0.45
CAPN3P20807 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CAPN3P20807 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN3P20807 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
CAPN3P20807 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN3P20807 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.85■□□□□ 0.45
CAPN3P20807 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN3P20807 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN3P20807 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.85■□□□□ 0.45
CAPN3P20807 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.85■□□□□ 0.45
CAPN3P20807 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN3P20807 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN3P20807 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.85■□□□□ 0.45
CAPN3P20807 AL445228.2-201ENST00000605589 952 ntBASIC17.85■□□□□ 0.45
CAPN3P20807 AC004264.1-201ENST00000608354 794 ntBASIC17.85■□□□□ 0.45
CAPN3P20807 AC012306.2-201ENST00000609350 630 ntBASIC17.85■□□□□ 0.45
CAPN3P20807 AL357033.4-201ENST00000617703 1807 ntBASIC17.85■□□□□ 0.45
CAPN3P20807 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
CAPN3P20807 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CAPN3P20807 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN3P20807 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN3P20807 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN3P20807 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CAPN3P20807 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CAPN3P20807 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
CAPN3P20807 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN3P20807 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CAPN3P20807 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.84■□□□□ 0.45
CAPN3P20807 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CAPN3P20807 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.84■□□□□ 0.45
CAPN3P20807 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms