Protein–RNA interactions for Protein: P20339

RAB5A, Ras-related protein Rab-5A, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5AP20339 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5AP20339 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC14.45□□□□□ -0.1
RAB5AP20339 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5AP20339 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RAB5AP20339 DUX4L19-201ENST00000557448 1267 ntBASIC14.45□□□□□ -0.1
RAB5AP20339 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB5AP20339 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB5AP20339 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
RAB5AP20339 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5AP20339 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB5AP20339 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RAB5AP20339 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5AP20339 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5AP20339 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RAB5AP20339 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5AP20339 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
RAB5AP20339 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB5AP20339 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RAB5AP20339 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5AP20339 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5AP20339 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5AP20339 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5AP20339 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB5AP20339 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5AP20339 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5AP20339 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5AP20339 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB5AP20339 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5AP20339 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5AP20339 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.44□□□□□ -0.1
RAB5AP20339 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5AP20339 PCDHA14-201ENST00000506751 2298 ntBASIC14.44□□□□□ -0.1
RAB5AP20339 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5AP20339 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5AP20339 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5AP20339 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5AP20339 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5AP20339 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB5AP20339 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5AP20339 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB5AP20339 SLC47A1P1-202ENST00000449666 945 ntBASIC14.44□□□□□ -0.1
RAB5AP20339 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC14.44□□□□□ -0.1
RAB5AP20339 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB5AP20339 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RAB5AP20339 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB5AP20339 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5AP20339 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5AP20339 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB5AP20339 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5AP20339 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB5AP20339 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
RAB5AP20339 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RAB5AP20339 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5AP20339 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5AP20339 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5AP20339 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5AP20339 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5AP20339 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5AP20339 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5AP20339 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5AP20339 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RAB5AP20339 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB5AP20339 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5AP20339 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
RAB5AP20339 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5AP20339 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RAB5AP20339 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.44□□□□□ -0.1
RAB5AP20339 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
RAB5AP20339 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.43□□□□□ -0.1
RAB5AP20339 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5AP20339 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.43□□□□□ -0.1
RAB5AP20339 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5AP20339 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB5AP20339 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5AP20339 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5AP20339 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5AP20339 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5AP20339 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5AP20339 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB5AP20339 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5AP20339 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5AP20339 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB5AP20339 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5AP20339 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.43□□□□□ -0.1
RAB5AP20339 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5AP20339 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RAB5AP20339 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5AP20339 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
RAB5AP20339 KRT16P3-201ENST00000439127 1283 ntBASIC14.43□□□□□ -0.1
RAB5AP20339 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5AP20339 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
RAB5AP20339 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5AP20339 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5AP20339 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC14.43□□□□□ -0.1
RAB5AP20339 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5AP20339 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5AP20339 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5AP20339 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5AP20339 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RAB5AP20339 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms