Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB4AP20338 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB4AP20338 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB4AP20338 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB4AP20338 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB4AP20338 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RAB4AP20338 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
RAB4AP20338 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB4AP20338 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB4AP20338 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB4AP20338 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
RAB4AP20338 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB4AP20338 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB4AP20338 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB4AP20338 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB4AP20338 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
RAB4AP20338 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB4AP20338 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB4AP20338 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB4AP20338 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB4AP20338 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB4AP20338 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB4AP20338 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB4AP20338 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB4AP20338 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB4AP20338 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
RAB4AP20338 AC073592.3-201ENST00000625118 1834 ntBASIC14.21□□□□□ -0.13
RAB4AP20338 IRS3P-201ENST00000223076 1006 ntBASIC14.21□□□□□ -0.13
RAB4AP20338 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB4AP20338 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB4AP20338 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB4AP20338 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB4AP20338 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB4AP20338 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC14.21□□□□□ -0.13
RAB4AP20338 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
RAB4AP20338 AC104187.1-201ENST00000607510 612 ntBASIC14.21□□□□□ -0.13
RAB4AP20338 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
RAB4AP20338 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB4AP20338 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB4AP20338 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
RAB4AP20338 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB4AP20338 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB4AP20338 AC126763.1-201ENST00000552015 2118 ntBASIC14.21□□□□□ -0.13
RAB4AP20338 AC005052.1-201ENST00000625181 2492 ntBASIC14.21□□□□□ -0.13
RAB4AP20338 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.21□□□□□ -0.14
RAB4AP20338 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RAB4AP20338 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
RAB4AP20338 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RAB4AP20338 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.14
RAB4AP20338 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RAB4AP20338 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
RAB4AP20338 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB4AP20338 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB4AP20338 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RAB4AP20338 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.2□□□□□ -0.14
RAB4AP20338 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB4AP20338 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB4AP20338 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.2□□□□□ -0.14
RAB4AP20338 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB4AP20338 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB4AP20338 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB4AP20338 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB4AP20338 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RAB4AP20338 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB4AP20338 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB4AP20338 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB4AP20338 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB4AP20338 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB4AP20338 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
RAB4AP20338 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB4AP20338 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RAB4AP20338 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB4AP20338 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC14.2□□□□□ -0.14
RAB4AP20338 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RAB4AP20338 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB4AP20338 AP001330.3-201ENST00000520123 633 ntBASIC14.2□□□□□ -0.14
RAB4AP20338 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC14.2□□□□□ -0.14
RAB4AP20338 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB4AP20338 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC14.2□□□□□ -0.14
RAB4AP20338 AL031963.3-201ENST00000606441 850 ntBASIC14.2□□□□□ -0.14
RAB4AP20338 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
RAB4AP20338 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.2□□□□□ -0.14
RAB4AP20338 KRT8P20-201ENST00000423953 1409 ntBASIC14.2□□□□□ -0.14
RAB4AP20338 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RAB4AP20338 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB4AP20338 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB4AP20338 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RAB4AP20338 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB4AP20338 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB4AP20338 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB4AP20338 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB4AP20338 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
RAB4AP20338 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.2□□□□□ -0.14
RAB4AP20338 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB4AP20338 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB4AP20338 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB4AP20338 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB4AP20338 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB4AP20338 AC012317.2-201ENST00000623305 2251 ntBASIC14.2□□□□□ -0.14
RAB4AP20338 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms