Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
NFKB1P19838 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NFKB1P19838 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.86■□□□□ 0.61
NFKB1P19838 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
NFKB1P19838 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NFKB1P19838 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
NFKB1P19838 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
NFKB1P19838 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NFKB1P19838 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NFKB1P19838 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.86■□□□□ 0.61
NFKB1P19838 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.86■□□□□ 0.61
NFKB1P19838 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.86■□□□□ 0.61
NFKB1P19838 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NFKB1P19838 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.86■□□□□ 0.61
NFKB1P19838 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.86■□□□□ 0.61
NFKB1P19838 WWOX-216ENST00000569818 525 ntBASIC18.86■□□□□ 0.61
NFKB1P19838 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.86■□□□□ 0.61
NFKB1P19838 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NFKB1P19838 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NFKB1P19838 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NFKB1P19838 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NFKB1P19838 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NFKB1P19838 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.86■□□□□ 0.61
NFKB1P19838 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NFKB1P19838 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NFKB1P19838 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NFKB1P19838 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
NFKB1P19838 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NFKB1P19838 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NFKB1P19838 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NFKB1P19838 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.85■□□□□ 0.61
NFKB1P19838 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
NFKB1P19838 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NFKB1P19838 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NFKB1P19838 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NFKB1P19838 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NFKB1P19838 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NFKB1P19838 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NFKB1P19838 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NFKB1P19838 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NFKB1P19838 AP000593.1-201ENST00000393668 712 ntBASIC18.85■□□□□ 0.61
NFKB1P19838 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NFKB1P19838 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.85■□□□□ 0.61
NFKB1P19838 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.85■□□□□ 0.61
NFKB1P19838 AC128688.1-201ENST00000487626 519 ntBASIC18.85■□□□□ 0.61
NFKB1P19838 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.85■□□□□ 0.61
NFKB1P19838 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.85■□□□□ 0.61
NFKB1P19838 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.85■□□□□ 0.61
NFKB1P19838 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
NFKB1P19838 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.85■□□□□ 0.61
NFKB1P19838 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NFKB1P19838 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NFKB1P19838 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NFKB1P19838 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NFKB1P19838 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
NFKB1P19838 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.85■□□□□ 0.61
NFKB1P19838 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
NFKB1P19838 AC007613.1-201ENST00000572811 2597 ntBASIC18.85■□□□□ 0.61
NFKB1P19838 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NFKB1P19838 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.84■□□□□ 0.61
NFKB1P19838 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
NFKB1P19838 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NFKB1P19838 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.84■□□□□ 0.61
NFKB1P19838 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NFKB1P19838 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NFKB1P19838 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.84■□□□□ 0.61
NFKB1P19838 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
NFKB1P19838 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NFKB1P19838 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
NFKB1P19838 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NFKB1P19838 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
NFKB1P19838 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.84■□□□□ 0.61
NFKB1P19838 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NFKB1P19838 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NFKB1P19838 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NFKB1P19838 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.84■□□□□ 0.61
NFKB1P19838 ECEL1P2-202ENST00000465689 757 ntBASIC18.84■□□□□ 0.61
NFKB1P19838 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
NFKB1P19838 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.84■□□□□ 0.61
NFKB1P19838 FAM87A-204ENST00000613235 858 ntBASIC18.84■□□□□ 0.61
NFKB1P19838 AC099343.3-201ENST00000605834 2503 ntBASIC18.84■□□□□ 0.61
NFKB1P19838 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
NFKB1P19838 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NFKB1P19838 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.84■□□□□ 0.61
NFKB1P19838 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.84■□□□□ 0.61
NFKB1P19838 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NFKB1P19838 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NFKB1P19838 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NFKB1P19838 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NFKB1P19838 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NFKB1P19838 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
NFKB1P19838 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NFKB1P19838 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
NFKB1P19838 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NFKB1P19838 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NFKB1P19838 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NFKB1P19838 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NFKB1P19838 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
NFKB1P19838 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
NFKB1P19838 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms