Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT4P19013 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.64■□□□□ 0.57
KRT4P19013 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.63■□□□□ 0.57
KRT4P19013 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KRT4P19013 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
KRT4P19013 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
KRT4P19013 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KRT4P19013 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT4P19013 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT4P19013 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.63■□□□□ 0.57
KRT4P19013 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT4P19013 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT4P19013 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.63■□□□□ 0.57
KRT4P19013 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT4P19013 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.63■□□□□ 0.57
KRT4P19013 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT4P19013 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.63■□□□□ 0.57
KRT4P19013 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
KRT4P19013 Z85996.1-201ENST00000494644 937 ntBASIC18.63■□□□□ 0.57
KRT4P19013 UNC93B4-201ENST00000505679 747 ntBASIC18.63■□□□□ 0.57
KRT4P19013 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.63■□□□□ 0.57
KRT4P19013 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.63■□□□□ 0.57
KRT4P19013 AC098934.4-201ENST00000564127 592 ntBASIC18.63■□□□□ 0.57
KRT4P19013 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT4P19013 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KRT4P19013 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
KRT4P19013 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KRT4P19013 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.63■□□□□ 0.57
KRT4P19013 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KRT4P19013 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.63■□□□□ 0.57
KRT4P19013 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.63■□□□□ 0.57
KRT4P19013 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.63■□□□□ 0.57
KRT4P19013 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT4P19013 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
KRT4P19013 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KRT4P19013 AC008556.1-201ENST00000610908 2040 ntBASIC18.62■□□□□ 0.57
KRT4P19013 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.62■□□□□ 0.57
KRT4P19013 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRT4P19013 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.62■□□□□ 0.57
KRT4P19013 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KRT4P19013 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KRT4P19013 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.62■□□□□ 0.57
KRT4P19013 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
KRT4P19013 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRT4P19013 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KRT4P19013 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRT4P19013 POM121L13P-201ENST00000422362 380 ntBASIC18.62■□□□□ 0.57
KRT4P19013 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KRT4P19013 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KRT4P19013 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.62■□□□□ 0.57
KRT4P19013 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRT4P19013 KRT8P11-201ENST00000409686 1436 ntBASIC18.62■□□□□ 0.57
KRT4P19013 KRT8P3-201ENST00000519669 1449 ntBASIC18.62■□□□□ 0.57
KRT4P19013 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.62■□□□□ 0.57
KRT4P19013 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRT4P19013 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRT4P19013 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
KRT4P19013 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.62■□□□□ 0.57
KRT4P19013 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KRT4P19013 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRT4P19013 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRT4P19013 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
KRT4P19013 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
KRT4P19013 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
KRT4P19013 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
KRT4P19013 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT4P19013 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT4P19013 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.61■□□□□ 0.57
KRT4P19013 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.61■□□□□ 0.57
KRT4P19013 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KRT4P19013 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KRT4P19013 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.61■□□□□ 0.57
KRT4P19013 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT4P19013 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT4P19013 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.61■□□□□ 0.57
KRT4P19013 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.61■□□□□ 0.57
KRT4P19013 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.61■□□□□ 0.57
KRT4P19013 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KRT4P19013 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.61■□□□□ 0.57
KRT4P19013 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.61■□□□□ 0.57
KRT4P19013 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
KRT4P19013 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
KRT4P19013 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KRT4P19013 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT4P19013 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.61■□□□□ 0.57
KRT4P19013 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KRT4P19013 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT4P19013 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KRT4P19013 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KRT4P19013 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT4P19013 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.6■□□□□ 0.57
KRT4P19013 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
KRT4P19013 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KRT4P19013 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT4P19013 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.6■□□□□ 0.57
KRT4P19013 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT4P19013 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT4P19013 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT4P19013 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
KRT4P19013 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms