Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
THRAP10827 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
THRAP10827 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
THRAP10827 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
THRAP10827 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
THRAP10827 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.62■□□□□ 0.57
THRAP10827 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.62■□□□□ 0.57
THRAP10827 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.62■□□□□ 0.57
THRAP10827 AC091390.4-202ENST00000476426 537 ntBASIC18.62■□□□□ 0.57
THRAP10827 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.62■□□□□ 0.57
THRAP10827 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.62■□□□□ 0.57
THRAP10827 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
THRAP10827 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
THRAP10827 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.62■□□□□ 0.57
THRAP10827 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
THRAP10827 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.62■□□□□ 0.57
THRAP10827 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
THRAP10827 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
THRAP10827 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
THRAP10827 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.62■□□□□ 0.57
THRAP10827 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.62■□□□□ 0.57
THRAP10827 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
THRAP10827 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.62■□□□□ 0.57
THRAP10827 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
THRAP10827 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
THRAP10827 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
THRAP10827 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
THRAP10827 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
THRAP10827 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
THRAP10827 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.61■□□□□ 0.57
THRAP10827 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
THRAP10827 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.61■□□□□ 0.57
THRAP10827 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
THRAP10827 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
THRAP10827 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
THRAP10827 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
THRAP10827 IRX1P1-201ENST00000438849 1838 ntBASIC18.61■□□□□ 0.57
THRAP10827 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.61■□□□□ 0.57
THRAP10827 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
THRAP10827 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.61■□□□□ 0.57
THRAP10827 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
THRAP10827 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
THRAP10827 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
THRAP10827 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.61■□□□□ 0.57
THRAP10827 INGX-201ENST00000359239 846 ntBASIC18.61■□□□□ 0.57
THRAP10827 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
THRAP10827 ATP5G1P1-201ENST00000448724 379 ntBASIC18.61■□□□□ 0.57
THRAP10827 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
THRAP10827 DUX4L26-201ENST00000489078 1255 ntBASIC18.61■□□□□ 0.57
THRAP10827 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.61■□□□□ 0.57
THRAP10827 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.61■□□□□ 0.57
THRAP10827 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
THRAP10827 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
THRAP10827 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
THRAP10827 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
THRAP10827 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
THRAP10827 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
THRAP10827 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.61■□□□□ 0.57
THRAP10827 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.6■□□□□ 0.57
THRAP10827 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
THRAP10827 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
THRAP10827 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.6■□□□□ 0.57
THRAP10827 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
THRAP10827 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.6■□□□□ 0.57
THRAP10827 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
THRAP10827 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.6■□□□□ 0.57
THRAP10827 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.6■□□□□ 0.57
THRAP10827 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
THRAP10827 AC104076.2-201ENST00000448912 469 ntBASIC18.6■□□□□ 0.57
THRAP10827 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
THRAP10827 AL160286.2-201ENST00000567150 934 ntBASIC18.6■□□□□ 0.57
THRAP10827 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
THRAP10827 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.6■□□□□ 0.57
THRAP10827 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
THRAP10827 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
THRAP10827 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
THRAP10827 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
THRAP10827 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
THRAP10827 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
THRAP10827 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.59■□□□□ 0.57
THRAP10827 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
THRAP10827 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.59■□□□□ 0.57
THRAP10827 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
THRAP10827 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
THRAP10827 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
THRAP10827 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
THRAP10827 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
THRAP10827 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
THRAP10827 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
THRAP10827 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
THRAP10827 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
THRAP10827 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
THRAP10827 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
THRAP10827 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
THRAP10827 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
THRAP10827 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.59■□□□□ 0.57
THRAP10827 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.59■□□□□ 0.57
THRAP10827 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
THRAP10827 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.59■□□□□ 0.57
THRAP10827 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms