Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RARBP10826 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.75■□□□□ 0.91
RARBP10826 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RARBP10826 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RARBP10826 KRT89P-201ENST00000620027 1478 ntBASIC20.75■□□□□ 0.91
RARBP10826 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RARBP10826 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.75■□□□□ 0.91
RARBP10826 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
RARBP10826 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.74■□□□□ 0.91
RARBP10826 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.74■□□□□ 0.91
RARBP10826 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RARBP10826 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RARBP10826 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.74■□□□□ 0.91
RARBP10826 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.74■□□□□ 0.91
RARBP10826 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
RARBP10826 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RARBP10826 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RARBP10826 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RARBP10826 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RARBP10826 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
RARBP10826 PMS2P1-201ENST00000431037 1228 ntBASIC20.74■□□□□ 0.91
RARBP10826 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.74■□□□□ 0.91
RARBP10826 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.74■□□□□ 0.91
RARBP10826 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RARBP10826 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RARBP10826 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RARBP10826 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.74■□□□□ 0.91
RARBP10826 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RARBP10826 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RARBP10826 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RARBP10826 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RARBP10826 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RARBP10826 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RARBP10826 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RARBP10826 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.73■□□□□ 0.91
RARBP10826 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RARBP10826 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RARBP10826 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
RARBP10826 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RARBP10826 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.73■□□□□ 0.91
RARBP10826 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RARBP10826 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RARBP10826 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.73■□□□□ 0.91
RARBP10826 AC091607.1-201ENST00000490318 1060 ntBASIC20.73■□□□□ 0.91
RARBP10826 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.73■□□□□ 0.91
RARBP10826 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.73■□□□□ 0.91
RARBP10826 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.73■□□□□ 0.91
RARBP10826 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RARBP10826 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.73■□□□□ 0.91
RARBP10826 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RARBP10826 TP73-AS1-207ENST00000624167 988 ntBASIC20.73■□□□□ 0.91
RARBP10826 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.73■□□□□ 0.91
RARBP10826 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.73■□□□□ 0.91
RARBP10826 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RARBP10826 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.73■□□□□ 0.91
RARBP10826 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.73■□□□□ 0.91
RARBP10826 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
RARBP10826 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.72■□□□□ 0.91
RARBP10826 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RARBP10826 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RARBP10826 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.72■□□□□ 0.91
RARBP10826 POM121L3P-201ENST00000419331 1163 ntBASIC20.72■□□□□ 0.91
RARBP10826 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RARBP10826 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.72■□□□□ 0.91
RARBP10826 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.72■□□□□ 0.91
RARBP10826 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RARBP10826 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.72■□□□□ 0.91
RARBP10826 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.72■□□□□ 0.91
RARBP10826 AL773604.1-201ENST00000617417 272 ntBASIC20.72■□□□□ 0.91
RARBP10826 AF228730.7-201ENST00000641842 219 ntBASIC20.72■□□□□ 0.91
RARBP10826 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RARBP10826 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RARBP10826 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RARBP10826 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.72■□□□□ 0.91
RARBP10826 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.72■□□□□ 0.91
RARBP10826 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RARBP10826 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RARBP10826 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RARBP10826 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RARBP10826 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.72■□□□□ 0.91
RARBP10826 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RARBP10826 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RARBP10826 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.71■□□□□ 0.91
RARBP10826 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RARBP10826 IRX1P1-201ENST00000438849 1838 ntBASIC20.71■□□□□ 0.91
RARBP10826 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
RARBP10826 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RARBP10826 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RARBP10826 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.71■□□□□ 0.91
RARBP10826 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RARBP10826 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RARBP10826 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.71■□□□□ 0.91
RARBP10826 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RARBP10826 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RARBP10826 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
RARBP10826 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
RARBP10826 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.71■□□□□ 0.91
RARBP10826 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RARBP10826 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.71■□□□□ 0.91
RARBP10826 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms