Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.84■□□□□ 0.29
FREM3P0C091 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.84■□□□□ 0.29
FREM3P0C091 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.84■□□□□ 0.29
FREM3P0C091 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.84■□□□□ 0.29
FREM3P0C091 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.84■□□□□ 0.29
FREM3P0C091 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.84■□□□□ 0.29
FREM3P0C091 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
FREM3P0C091 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FREM3P0C091 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FREM3P0C091 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FREM3P0C091 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FREM3P0C091 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FREM3P0C091 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FREM3P0C091 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FREM3P0C091 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
FREM3P0C091 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.84■□□□□ 0.29
FREM3P0C091 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FREM3P0C091 AP000593.1-201ENST00000393668 712 ntBASIC16.84■□□□□ 0.29
FREM3P0C091 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.84■□□□□ 0.29
FREM3P0C091 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.84■□□□□ 0.29
FREM3P0C091 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.84■□□□□ 0.29
FREM3P0C091 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.84■□□□□ 0.29
FREM3P0C091 AL121956.5-201ENST00000625261 221 ntBASIC16.84■□□□□ 0.29
FREM3P0C091 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
FREM3P0C091 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FREM3P0C091 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FREM3P0C091 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FREM3P0C091 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
FREM3P0C091 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
FREM3P0C091 ANO7L1-203ENST00000602586 1720 ntBASIC16.83■□□□□ 0.29
FREM3P0C091 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
FREM3P0C091 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
FREM3P0C091 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FREM3P0C091 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FREM3P0C091 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
FREM3P0C091 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FREM3P0C091 KRT18P23-201ENST00000435622 1283 ntBASIC16.83■□□□□ 0.28
FREM3P0C091 AL499627.1-201ENST00000569373 2188 ntBASIC16.83■□□□□ 0.28
FREM3P0C091 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.83■□□□□ 0.28
FREM3P0C091 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FREM3P0C091 AL391807.1-203ENST00000604392 2365 ntBASIC16.83■□□□□ 0.28
FREM3P0C091 AL109659.2-201ENST00000606809 1674 ntBASIC16.83■□□□□ 0.28
FREM3P0C091 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
FREM3P0C091 AL590326.2-201ENST00000625139 305 ntBASIC16.83■□□□□ 0.28
FREM3P0C091 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FREM3P0C091 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FREM3P0C091 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
FREM3P0C091 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
FREM3P0C091 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
FREM3P0C091 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
FREM3P0C091 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FREM3P0C091 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
FREM3P0C091 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
FREM3P0C091 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FREM3P0C091 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FREM3P0C091 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FREM3P0C091 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FREM3P0C091 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FREM3P0C091 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.82■□□□□ 0.28
FREM3P0C091 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.82■□□□□ 0.28
FREM3P0C091 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FREM3P0C091 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.82■□□□□ 0.28
FREM3P0C091 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
FREM3P0C091 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.82■□□□□ 0.28
FREM3P0C091 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FREM3P0C091 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.82■□□□□ 0.28
FREM3P0C091 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
FREM3P0C091 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
FREM3P0C091 WIZP1-201ENST00000531444 2299 ntBASIC16.82■□□□□ 0.28
FREM3P0C091 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FREM3P0C091 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FREM3P0C091 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FREM3P0C091 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FREM3P0C091 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FREM3P0C091 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
FREM3P0C091 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FREM3P0C091 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FREM3P0C091 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.82■□□□□ 0.28
FREM3P0C091 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FREM3P0C091 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.82■□□□□ 0.28
FREM3P0C091 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
FREM3P0C091 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FREM3P0C091 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.82■□□□□ 0.28
FREM3P0C091 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.81■□□□□ 0.28
FREM3P0C091 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FREM3P0C091 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FREM3P0C091 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FREM3P0C091 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.81■□□□□ 0.28
FREM3P0C091 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FREM3P0C091 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.81■□□□□ 0.28
FREM3P0C091 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.81■□□□□ 0.28
FREM3P0C091 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FREM3P0C091 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FREM3P0C091 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.81■□□□□ 0.28
FREM3P0C091 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.81■□□□□ 0.28
FREM3P0C091 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
FREM3P0C091 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FREM3P0C091 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
FREM3P0C091 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
FREM3P0C091 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms